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Chlorine in PDB 5syx: Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F

Enzymatic activity of Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F

All present enzymatic activity of Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F:
1.11.1.21;

Protein crystallography data

The structure of Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F, PDB code: 5syx was solved by P.C.Loewen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.77
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 100.667, 115.954, 175.022, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 17.2

Other elements in 5syx:

The structure of Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F (pdb code 5syx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F, PDB code: 5syx:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5syx

Go back to Chlorine Binding Sites List in 5syx
Chlorine binding site 1 out of 2 in the Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl803

b:38.3
occ:1.00
O A:HOH1542 2.9 19.9 1.0
O A:HOH1675 3.0 18.1 1.0
CG A:GLU198 3.1 49.2 1.0
O A:HOH1587 3.2 18.0 1.0
CB A:GLU198 3.3 37.9 1.0
N A:GLY124 3.4 14.9 1.0
CG2 A:VAL200 3.4 25.1 1.0
O A:HOH1539 3.8 32.1 1.0
CA A:GLY124 4.1 14.8 1.0
CB A:ARG123 4.4 18.1 1.0
OE1 A:GLU128 4.4 25.1 1.0
O A:HOH1080 4.4 43.3 1.0
CD A:GLU198 4.5 54.3 1.0
CA A:ARG123 4.5 15.8 1.0
C A:ARG123 4.5 15.0 1.0
NA A:NA802 4.7 16.8 1.0
O A:HOH1436 4.7 18.8 1.0
CG A:GLN130 4.8 17.2 1.0
C A:GLY124 4.8 15.8 1.0
O A:GLY124 4.8 14.6 1.0
CA A:GLU198 4.8 28.1 1.0
OE2 A:GLU128 4.8 30.6 1.0
CD A:GLU128 4.9 26.4 1.0
CG A:ARG123 4.9 16.5 1.0
CB A:VAL200 4.9 23.4 1.0

Chlorine binding site 2 out of 2 in 5syx

Go back to Chlorine Binding Sites List in 5syx
Chlorine binding site 2 out of 2 in the Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Burkholderia Pseudomallei Katg Variant W139F within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl803

b:38.5
occ:1.00
O B:HOH1638 3.1 14.6 1.0
O B:HOH1551 3.1 18.1 1.0
O B:HOH1514 3.1 20.6 1.0
CG B:GLU198 3.2 46.2 1.0
CB B:GLU198 3.3 34.4 1.0
N B:GLY124 3.4 15.3 1.0
CG2 B:VAL200 3.5 19.0 1.0
O B:HOH1535 3.9 27.8 1.0
CA B:GLY124 4.0 14.5 1.0
OE1 B:GLU128 4.2 25.8 1.0
C B:ARG123 4.4 14.1 1.0
CD B:GLU198 4.4 55.2 1.0
CB B:ARG123 4.4 14.6 1.0
CA B:ARG123 4.5 13.8 1.0
CG B:GLN130 4.6 16.4 1.0
OE2 B:GLU128 4.6 28.3 1.0
O B:HOH1284 4.6 47.0 1.0
CD B:GLU128 4.7 26.1 1.0
O B:HOH1323 4.7 17.1 1.0
NA B:NA802 4.8 17.0 1.0
O B:GLY124 4.8 14.9 1.0
C B:GLY124 4.8 14.7 1.0
CA B:GLU198 4.9 23.5 1.0
CG B:ARG123 4.9 14.6 1.0
CB B:VAL200 5.0 18.5 1.0

Reference:

P.C.Loewen, P.C.Loewen. N/A N/A.
Page generated: Sat Jul 12 08:43:16 2025

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