Atomistry » Chlorine » PDB 5ti4-5tr9 » 5tjh
Atomistry »
  Chlorine »
    PDB 5ti4-5tr9 »
      5tjh »

Chlorine in PDB 5tjh: Hugdh A136M Substitution

Enzymatic activity of Hugdh A136M Substitution

All present enzymatic activity of Hugdh A136M Substitution:
1.1.1.22;

Protein crystallography data

The structure of Hugdh A136M Substitution, PDB code: 5tjh was solved by N.R.Beattie, Z.A.Wood, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.17 / 2.05
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 92.350, 104.590, 107.710, 64.82, 68.35, 73.72
R / Rfree (%) 17.1 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hugdh A136M Substitution (pdb code 5tjh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Hugdh A136M Substitution, PDB code: 5tjh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5tjh

Go back to Chlorine Binding Sites List in 5tjh
Chlorine binding site 1 out of 2 in the Hugdh A136M Substitution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hugdh A136M Substitution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:78.5
occ:1.00
O B:HOH653 3.5 42.6 1.0
OG B:SER316 3.5 47.9 1.0
CD1 B:TYR356 4.0 48.8 1.0
CG A:MET98 4.1 86.3 1.0
CG B:TYR356 4.2 39.6 1.0
SD A:MET98 4.3 94.2 1.0
O B:ARG312 4.3 34.2 1.0
CB B:TYR356 4.4 42.6 1.0
CG B:ARG312 4.4 46.3 1.0
CE1 B:TYR356 4.5 54.9 1.0
CB B:ALA315 4.5 35.5 1.0
N B:SER316 4.7 37.3 1.0
CB B:SER316 4.8 38.6 1.0
CD2 B:TYR356 4.8 39.5 1.0
CD1 B:ILE319 4.8 48.3 1.0
CA B:SER316 4.9 39.4 1.0

Chlorine binding site 2 out of 2 in 5tjh

Go back to Chlorine Binding Sites List in 5tjh
Chlorine binding site 2 out of 2 in the Hugdh A136M Substitution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Hugdh A136M Substitution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl502

b:56.5
occ:1.00
O D:HOH659 3.3 42.6 1.0
N D:MET419 3.4 49.5 1.0
CE3 D:TRP417 3.6 40.1 1.0
N D:ASP418 3.6 43.2 1.0
CB D:MET419 3.7 45.6 1.0
CG D:MET419 3.7 48.7 1.0
CB D:TRP417 3.9 45.6 1.0
CA D:MET419 4.1 45.2 1.0
CB D:ASP418 4.2 55.9 1.0
C D:TRP417 4.2 44.9 1.0
CA D:ASP418 4.2 47.9 1.0
C D:ASP418 4.2 50.7 1.0
CD2 D:TRP417 4.3 37.7 1.0
SD D:MET419 4.3 52.2 1.0
CA D:TRP417 4.4 48.1 1.0
CZ3 D:TRP417 4.4 41.6 1.0
CG D:TRP417 4.6 38.6 1.0
O D:HOH684 4.8 60.0 1.0
CG D:ASP418 4.9 62.9 1.0
OD2 D:ASP418 5.0 67.2 1.0

Reference:

N.R.Beattie, N.D.Keul, A.M.Sidlo, Z.A.Wood. Allostery and Hysteresis Are Coupled in Human Udp-Glucose Dehydrogenase. Biochemistry V. 56 202 2017.
ISSN: ISSN 1520-4995
PubMed: 27966912
DOI: 10.1021/ACS.BIOCHEM.6B01044
Page generated: Fri Jul 26 17:30:00 2024

Last articles

Ca in 5MYI
Ca in 5MZO
Ca in 5MXX
Ca in 5MY9
Ca in 5MYC
Ca in 5MWC
Ca in 5MWB
Ca in 5MWK
Ca in 5MW5
Ca in 5MUW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy