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Chlorine in PDB 5tqi: Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans

Enzymatic activity of Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans

All present enzymatic activity of Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans:
2.7.1.35;

Protein crystallography data

The structure of Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans, PDB code: 5tqi was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.83 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 82.970, 42.490, 90.510, 90.00, 115.56, 90.00
R / Rfree (%) 13.8 / 17.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans (pdb code 5tqi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans, PDB code: 5tqi:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5tqi

Go back to Chlorine Binding Sites List in 5tqi
Chlorine binding site 1 out of 2 in the Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl300

b:23.2
occ:1.00
O A:HOH650 3.0 26.1 1.0
O B:HOH616 3.3 21.7 1.0
ND2 A:ASN36 3.3 11.4 1.0
ND2 B:ASN36 3.3 11.8 1.0
CB A:ASN36 3.6 9.7 1.0
CB B:ASN36 3.7 8.0 1.0
CG A:ASN36 4.0 9.0 1.0
CG B:ASN36 4.0 9.9 1.0
NE2 A:GLN39 4.1 15.7 1.0
NE2 B:GLN39 4.2 13.4 1.0
CD A:GLN39 4.2 15.7 1.0
O A:HOH528 4.3 36.5 1.0
CD B:GLN39 4.3 13.6 1.0
CB A:GLN39 4.3 12.6 1.0
CB B:GLN39 4.3 11.8 1.0
OE1 A:GLN39 4.5 16.4 1.0
OE1 B:GLN39 4.5 14.2 1.0
O B:HOH514 4.7 28.3 1.0
CD2 B:HIS10 4.7 11.3 1.0
CG A:GLN39 4.8 14.8 1.0
CD2 A:HIS10 4.9 13.0 1.0
CG B:GLN39 4.9 11.8 1.0
CB B:HIS10 4.9 11.1 1.0
O B:ASN36 4.9 10.9 1.0
O A:ASN36 4.9 11.8 1.0
CB A:HIS10 5.0 10.0 1.0
CG B:HIS10 5.0 11.9 1.0

Chlorine binding site 2 out of 2 in 5tqi

Go back to Chlorine Binding Sites List in 5tqi
Chlorine binding site 2 out of 2 in the Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:25.5
occ:1.00
O B:HOH562 2.9 19.6 1.0
NH2 B:ARG207 3.2 10.0 1.0
NH1 B:ARG207 3.3 11.2 1.0
O B:HOH429 3.3 42.0 1.0
CE1 B:HIS215 3.4 42.0 1.0
O B:HOH649 3.7 36.8 1.0
CZ B:ARG207 3.7 9.6 1.0
CE1 B:PHE192 3.9 13.9 1.0
CD1 B:PHE192 4.0 12.3 1.0
NE2 B:HIS215 4.0 42.9 1.0
CG1 B:VAL252 4.0 10.8 1.0
CG2 B:VAL252 4.2 8.5 1.0
CG1 B:VAL219 4.2 11.1 1.0
ND1 B:HIS215 4.6 40.7 1.0
CG2 B:VAL219 4.6 10.5 1.0
CZ B:PHE192 4.7 14.1 1.0
CB B:VAL252 4.7 8.3 1.0
CG B:PHE192 4.8 11.5 1.0
CB B:VAL219 4.9 9.4 1.0
O B:HOH667 4.9 48.5 1.0

Reference:

E.J.Levin, J.Abendroth, D.D.Lorimer, T.E.Edwards. Crystal Structure of A Pyridoxal Kinase From Burkholderia Multivorans To Be Published.
Page generated: Sat Jul 12 09:01:43 2025

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