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Chlorine in PDB 5tvh: Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21

Protein crystallography data

The structure of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21, PDB code: 5tvh was solved by G.A.Camacho-Hernandez, K.Kaczanowska, M.Harel, M.G.Finn, P.W.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.47 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.780, 88.100, 115.500, 90.00, 97.50, 90.00
R / Rfree (%) 19.1 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21 (pdb code 5tvh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21, PDB code: 5tvh:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 5tvh

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Chlorine binding site 1 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:44.4
occ:1.00
CL6 A:7KO301 0.0 44.4 1.0
C6 A:7KO301 1.8 39.9 1.0
N1 A:7KO301 2.7 32.4 1.0
C5 A:7KO301 2.8 29.5 1.0
OG1 E:THR36 3.3 13.8 1.0
CD1 E:TYR55 3.7 18.9 1.0
C2 A:7KO301 3.9 23.8 1.0
CB E:THR36 4.1 14.0 1.0
C4 A:7KO301 4.1 27.6 1.0
CB E:TYR55 4.2 17.0 1.0
CG E:TYR55 4.4 16.8 1.0
CG2 E:ILE118 4.4 17.1 1.0
CG2 E:THR36 4.4 14.8 1.0
N3 A:7KO301 4.6 27.4 1.0
CE1 E:TYR55 4.6 25.1 1.0
CB A:CYS190 4.6 34.4 1.0
CD1 E:ILE118 4.9 24.4 1.0
SG A:CYS190 5.0 53.9 1.0

Chlorine binding site 2 out of 5 in 5tvh

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Chlorine binding site 2 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:77.5
occ:1.00
CL6 B:7KO301 0.0 77.5 1.0
C6 B:7KO301 1.7 56.9 1.0
N1 B:7KO301 2.6 55.8 1.0
C5 B:7KO301 2.6 44.9 1.0
OG1 A:THR36 3.8 22.7 1.0
CD1 A:TYR55 3.8 26.0 1.0
C2 B:7KO301 3.9 57.0 1.0
C4 B:7KO301 3.9 52.1 1.0
CB A:TYR55 4.4 20.0 1.0
CB A:THR36 4.4 22.8 1.0
N3 B:7KO301 4.5 47.6 1.0
CG A:TYR55 4.6 22.5 1.0
CG2 A:ILE118 4.6 14.8 1.0
CE1 A:TYR55 4.7 28.1 1.0
CG2 A:THR36 4.7 18.2 1.0
CD1 A:ILE118 4.7 18.4 1.0
NAA B:7KO301 5.0 55.7 1.0

Chlorine binding site 3 out of 5 in 5tvh

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Chlorine binding site 3 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:60.3
occ:1.00
CL6 C:7KO301 0.0 60.3 1.0
C6 C:7KO301 1.7 39.3 1.0
N1 C:7KO301 2.6 42.5 1.0
C5 C:7KO301 2.7 31.4 1.0
OG1 B:THR36 3.5 21.2 1.0
CD1 B:TYR55 3.7 32.2 1.0
C2 C:7KO301 3.9 31.2 1.0
C4 C:7KO301 4.0 30.6 1.0
CB B:THR36 4.1 21.4 1.0
CB B:TYR55 4.3 28.6 1.0
CG2 B:THR36 4.4 26.2 1.0
CG B:TYR55 4.5 26.5 1.0
N3 C:7KO301 4.5 29.0 1.0
CE1 B:TYR55 4.6 28.4 1.0
CG2 B:ILE118 4.6 22.3 1.0
CD1 B:ILE118 4.7 21.4 1.0
NAA C:7KO301 4.9 34.1 1.0
OD2 B:ASP164 5.0 29.7 1.0

Chlorine binding site 4 out of 5 in 5tvh

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Chlorine binding site 4 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:60.4
occ:1.00
CL6 C:7KO302 0.0 60.4 1.0
C6 C:7KO302 1.7 48.3 1.0
N1 C:7KO302 2.6 48.4 1.0
C5 C:7KO302 2.7 42.3 1.0
OG1 C:THR36 3.5 25.0 1.0
CD1 C:TYR55 3.9 26.8 1.0
C2 C:7KO302 3.9 45.3 1.0
C4 C:7KO302 4.0 42.9 1.0
CB C:THR36 4.2 24.5 1.0
CB C:TYR55 4.4 22.5 1.0
CG2 C:ILE118 4.5 20.5 1.0
OE1 C:GLN57 4.5 37.3 1.0
N3 C:7KO302 4.5 46.0 1.0
CG2 C:THR36 4.6 21.4 1.0
CG C:TYR55 4.6 29.7 1.0
CD1 C:ILE118 4.7 27.6 1.0
CE1 C:TYR55 4.8 28.7 1.0
NAA C:7KO302 5.0 43.3 1.0

Chlorine binding site 5 out of 5 in 5tvh

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Chlorine binding site 5 out of 5 in the Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Achbp From Aplysia Californica Complex with 2- Aminopyrimidine at pH 8.0 Spacegroup P21 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:52.4
occ:1.00
CL6 E:7KO301 0.0 52.4 1.0
C6 E:7KO301 1.7 41.1 1.0
N1 E:7KO301 2.6 41.4 1.0
C5 E:7KO301 2.7 32.7 1.0
OG1 D:THR36 3.5 23.1 1.0
C2 E:7KO301 3.9 42.0 1.0
C4 E:7KO301 4.0 33.9 1.0
CD1 D:TYR55 4.1 24.8 1.0
CG2 D:ILE118 4.2 18.4 1.0
NE2 D:GLN57 4.2 51.5 1.0
CB D:THR36 4.4 24.3 1.0
N3 E:7KO301 4.5 40.5 1.0
CB E:CYS190 4.5 43.4 1.0
CB D:TYR55 4.6 24.1 1.0
CG2 D:THR36 4.8 21.9 1.0
CG D:TYR55 4.9 27.2 1.0
CD D:GLN57 4.9 48.8 1.0
CE1 D:TYR55 5.0 28.6 1.0
NAA E:7KO301 5.0 38.2 1.0

Reference:

G.A.Camacho-Hernandez, K.Kaczanowska, M.Harel, M.G.Finn, P.W.Taylor. Crystal Structure of Achbp From Aplysia Californica Complex with 2-Aminopyrimidine at pH 7.0 Spacegroup P212121 To Be Published.
Page generated: Sat Jul 12 09:07:49 2025

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