Chlorine in PDB 5u1h: Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa

The structure of Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa, PDB code: 5u1h was solved by N.Watanabe, P.J.Stogios, T.Skarina, Z.Wawrzak, R.Di Leo, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.23 / 1.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	53.340, 55.920, 79.080, 90.00, 107.78, 90.00
R / Rfree (%)	16.6 / 20

The binding sites of Chlorine atom in the Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa (pdb code 5u1h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa, PDB code: 5u1h:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:25.8 occ:1.00 OG A:SER41 2.9 15.8 1.0 O A:HOH467 2.9 31.9 1.0 N A:SER41 3.1 10.3 1.0 C A:TYR39 3.2 14.8 1.0 N A:PRO40 3.3 13.0 1.0 CA A:TYR39 3.4 11.8 1.0 CB A:SER41 3.5 13.6 1.0 CD A:PRO40 3.6 17.3 1.0 CB A:TYR39 3.6 11.5 1.0 O A:TYR39 3.7 10.9 1.0 CA A:SER41 3.8 11.5 1.0 C A:PRO40 4.1 11.8 1.0 O A:HOH327 4.2 24.7 1.0 CA A:PRO40 4.2 11.8 1.0 O A:HOH382 4.2 25.7 1.0 CD1 A:TYR39 4.4 10.8 1.0 N A:THR42 4.5 10.1 1.0 CG A:TYR39 4.5 10.6 1.0 C A:SER41 4.5 10.4 1.0 CG A:PRO40 4.7 14.9 1.0 O B:HOH361 4.7 38.7 1.0 CG2 A:THR42 4.7 10.6 1.0 N A:TYR39 4.8 11.8 1.0 CB A:PRO40 4.8 15.9 1.0 O A:HOH432 5.0 27.8 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl208 b:30.4 occ:1.00 OG B:SER41 2.7 22.5 1.0 N B:SER41 3.2 15.0 1.0 C B:TYR39 3.4 16.7 1.0 CB B:SER41 3.5 19.8 1.0 N B:PRO40 3.5 16.0 1.0 CA B:TYR39 3.5 15.5 1.0 CD B:PRO40 3.6 21.5 1.0 CB B:TYR39 3.7 18.2 1.0 CA B:SER41 3.9 14.9 1.0 O B:TYR39 3.9 14.7 1.0 C B:PRO40 4.3 14.5 1.0 CA B:PRO40 4.4 16.7 1.0 CD1 B:TYR39 4.5 18.8 1.0 N B:THR42 4.5 14.1 1.0 O B:HOH395 4.5 29.0 1.0 C B:SER41 4.6 12.3 1.0 CG2 B:THR42 4.6 15.5 1.0 CG B:TYR39 4.6 17.7 1.0 O B:HOH367 4.8 31.8 1.0 CG B:PRO40 4.9 28.8 1.0 O B:HOH378 4.9 23.3 1.0 N B:TYR39 4.9 15.9 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the C-Terminal Peptidoglycan Binding Domain of Oprf (PA1777) From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl204 b:26.5 occ:1.00 OG D:SER41 2.9 21.0 1.0 O C:HOH438 3.0 35.3 1.0 N D:SER41 3.2 11.6 1.0 C D:TYR39 3.3 13.0 1.0 O D:HOH452 3.3 34.9 1.0 N D:PRO40 3.4 11.1 1.0 CA D:TYR39 3.4 11.2 1.0 CB D:SER41 3.5 14.2 1.0 O C:HOH439 3.6 35.2 1.0 CD D:PRO40 3.6 13.8 1.0 CB D:TYR39 3.8 13.0 1.0 O D:TYR39 3.9 10.9 1.0 CA D:SER41 3.9 10.9 1.0 O D:HOH479 3.9 34.4 1.0 C D:PRO40 4.1 10.5 1.0 CG D:PRO40 4.2 17.9 1.0 CD1 D:TYR39 4.2 17.1 1.0 CA D:PRO40 4.3 11.1 1.0 O D:HOH344 4.3 20.6 1.0 O D:HOH337 4.4 28.7 1.0 CG D:TYR39 4.5 13.3 1.0 N D:THR42 4.6 11.6 1.0 C D:SER41 4.7 11.5 1.0 N D:TYR39 4.8 11.2 1.0 O D:HOH330 4.9 27.7 1.0 CB D:PRO40 4.9 15.9 1.0 CG2 D:THR42 4.9 11.6 1.0 O D:GLN38 5.0 15.0 1.0 O C:HOH472 5.0 35.2 1.0

N.Watanabe, N.Watanabe, P.J.Stogios, T.Skarina, Z.Wawrzak, R.Di Leo, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.