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Chlorine in PDB 5u9c: 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica

Protein crystallography data

The structure of 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica, PDB code: 5u9c was solved by G.Minasov, L.Shuvalova, K.Flores, I.Dubrovska, A.Olphie, S.Grimshaw, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.94 / 1.90
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 132.445, 184.871, 187.017, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 19.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica (pdb code 5u9c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica, PDB code: 5u9c:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5u9c

Go back to Chlorine Binding Sites List in 5u9c
Chlorine binding site 1 out of 2 in the 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl303

b:57.5
occ:0.50
CL D:CL303 0.0 57.5 0.5
CL D:CL303 1.9 59.0 0.5
O D:HOH555 3.4 39.5 1.0
N D:PHE165 3.5 36.3 1.0
O D:HOH638 3.7 73.8 1.0
CB D:LYS164 3.7 45.0 1.0
NH2 D:ARG222 3.8 47.8 1.0
CB D:PHE165 3.9 37.2 1.0
CD D:LYS164 4.2 55.6 1.0
CA D:PHE165 4.3 35.7 1.0
CG D:LYS164 4.3 51.5 1.0
O D:HOH571 4.3 39.4 1.0
NH1 D:ARG222 4.3 47.4 1.0
CA D:LYS164 4.3 42.5 1.0
CZ D:ARG222 4.4 45.8 1.0
C D:LYS164 4.4 39.0 1.0

Chlorine binding site 2 out of 2 in 5u9c

Go back to Chlorine Binding Sites List in 5u9c
Chlorine binding site 2 out of 2 in the 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl303

b:59.0
occ:0.50
CL D:CL303 0.0 59.0 0.5
CL D:CL303 1.9 57.5 0.5
O D:HOH638 2.9 73.8 1.0
N D:PHE165 3.7 36.3 1.0
NZ D:LYS168 4.0 63.8 1.0
CD D:LYS164 4.1 55.6 1.0
CA D:LYS164 4.2 42.5 1.0
CB D:LYS164 4.3 45.0 1.0
C D:LYS164 4.3 39.0 1.0
CB D:PHE165 4.4 37.2 1.0
CA D:PHE165 4.5 35.7 1.0
CE D:LYS168 4.7 58.0 1.0
CG D:LYS164 4.8 51.5 1.0
NH2 D:ARG222 4.8 47.8 1.0
O D:HOH603 4.8 49.1 1.0

Reference:

G.Minasov, L.Shuvalova, K.Flores, I.Dubrovska, A.Olphie, S.Grimshaw, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.9 Angstrom Resolution Crystal Structure of Dtdp-4-Dehydrorhamnose Reductase From Yersinia Enterocolitica. To Be Published.
Page generated: Sat Jul 12 09:16:52 2025

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