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Chlorine in PDB 5ub9: Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni

Enzymatic activity of Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni

All present enzymatic activity of Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni:
2.4.2.17;

Protein crystallography data

The structure of Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni, PDB code: 5ub9 was solved by G.Mittelstaedt, W.Jiao, E.K.Livingstone, E.J.Parker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.96 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.697, 79.926, 91.006, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 24.3

Other elements in 5ub9:

The structure of Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni (pdb code 5ub9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni, PDB code: 5ub9:

Chlorine binding site 1 out of 1 in 5ub9

Go back to Chlorine Binding Sites List in 5ub9
Chlorine binding site 1 out of 1 in the Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:30.0
occ:1.00
ZN A:ZN301 2.1 17.7 0.6
NE2 A:HIS35 3.3 31.7 1.0
ND1 A:HIS33 3.5 32.9 1.0
CE1 A:HIS35 3.6 32.3 1.0
CE1 A:HIS33 4.1 33.6 1.0
CG A:HIS33 4.4 32.5 1.0
O A:HOH495 4.5 32.3 1.0
CD2 A:HIS35 4.5 33.0 1.0
CB A:HIS33 4.7 31.8 1.0
ND1 A:HIS35 4.9 31.7 1.0

Reference:

G.Mittelstadt, W.Jiao, E.K.Livingstone, G.J.Moggre, A.R.Nazmi, E.J.Parker. A Dimeric Catalytic Core Relates the Short and Long Forms of Atp-Phosphoribosyltransferase. Biochem. J. V. 475 247 2018.
ISSN: ESSN 1470-8728
PubMed: 29208762
DOI: 10.1042/BCJ20170762
Page generated: Fri Jul 26 18:01:03 2024

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