Chlorine in PDB 5umh: Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans

Enzymatic activity of Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans

All present enzymatic activity of Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans:
1.13.11.1;

Protein crystallography data

The structure of Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans, PDB code: 5umh was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	31.15 / 1.35
*Space group*	C 1 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	115.220, 52.330, 121.290, 90.00, 93.15, 90.00
*R / R_free (%)*	13 / 16.3

Other elements in 5umh:

The structure of Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans also contains other interesting chemical elements:

Calcium	(Ca)	1 atom
Zinc	(Zn)	2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans (pdb code 5umh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans, PDB code: 5umh:

Chlorine binding site 1 out of 1 in 5umh

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Chlorine Binding Sites List in 5umh

Chlorine binding site 1 out of 1 in the Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Catechol 1,2-Dioxygenase Protein From Burkholderia Multivorans within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl404 b:20.7 occ:1.00	O	A:HOH781	2.6	44.6	1.0
	O2	A:EDO409	2.9	51.0	1.0
	N	A:HIS166	3.0	11.3	1.0
	N	A:GLN173	3.2	17.0	1.0
	CA	A:HIS166	3.5	12.2	1.0
	N	A:ASP168	3.6	14.6	1.0
	CA	A:ALA172	3.7	19.4	1.0
	CB	A:ASP168	3.7	15.1	1.0
	N	A:PHE167	3.8	12.9	1.0
	C	A:HIS166	3.8	13.1	1.0
	C2	A:EDO409	3.9	51.3	1.0
	C	A:ALA172	3.9	18.2	1.0
	C	A:SER165	4.0	11.5	1.0
	CB	A:GLN173	4.0	14.5	1.0
	CG	A:GLN173	4.0	14.0	1.0
	CA	A:SER165	4.1	11.4	1.0
	O	A:GLY171	4.1	23.1	1.0
	CA	A:GLN173	4.2	15.6	1.0
	CA	A:ASP168	4.2	15.1	1.0
	O	A:ASP168	4.4	18.9	1.0
	O	A:TYR164	4.4	11.8	1.0
	CB	A:ALA172	4.4	20.2	1.0
	O	A:GLN173	4.4	16.8	1.0
	C	A:PHE167	4.6	15.3	1.0
	N	A:ALA172	4.6	20.8	1.0
	O	A:HIS166	4.7	15.7	1.0
	C	A:GLY171	4.7	22.3	1.0
	CA	A:PHE167	4.7	13.9	1.0
	C	A:GLN173	4.8	14.9	1.0
	C	A:ASP168	4.8	17.9	1.0
	CB	A:SER165	4.9	11.8	1.0
	CD	A:GLN173	4.9	14.1	1.0
	CG	A:ASP168	5.0	15.7	1.0
	CB	A:HIS166	5.0	13.0	1.0

Reference:

S.L.Delker, J.Abendroth, D.Lorimer, T.E.Edwards. Crystal Structure of Catechol 1,2-Dioxygenase Protein, From Burkholderia Multivorans Atcc 17616 To Be Published.

Page generated: Sat Jul 12 09:25:04 2025

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