Atomistry » Chlorine » PDB 5wkx-5ws6 » 5wpn
Atomistry »
  Chlorine »
    PDB 5wkx-5ws6 »
      5wpn »

Chlorine in PDB 5wpn: Zn-Bound Structure of Chaetopterus Variopedatus Ferritin

Enzymatic activity of Zn-Bound Structure of Chaetopterus Variopedatus Ferritin

All present enzymatic activity of Zn-Bound Structure of Chaetopterus Variopedatus Ferritin:
1.16.3.1;

Protein crystallography data

The structure of Zn-Bound Structure of Chaetopterus Variopedatus Ferritin, PDB code: 5wpn was solved by E.De Meulenaere, J.B.Bailey, F.A.Tezcan, D.Deheyn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.47 / 1.57
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 181.870, 181.870, 181.870, 90.00, 90.00, 90.00
R / Rfree (%) 13.8 / 16.3

Other elements in 5wpn:

The structure of Zn-Bound Structure of Chaetopterus Variopedatus Ferritin also contains other interesting chemical elements:

Zinc (Zn) 12 atoms
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Zn-Bound Structure of Chaetopterus Variopedatus Ferritin (pdb code 5wpn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Zn-Bound Structure of Chaetopterus Variopedatus Ferritin, PDB code: 5wpn:

Chlorine binding site 1 out of 1 in 5wpn

Go back to Chlorine Binding Sites List in 5wpn
Chlorine binding site 1 out of 1 in the Zn-Bound Structure of Chaetopterus Variopedatus Ferritin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Zn-Bound Structure of Chaetopterus Variopedatus Ferritin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl214

b:26.5
occ:1.00
ZN A:ZN205 2.2 11.4 0.8
HB2 A:ALA119 2.9 28.7 1.0
O A:HOH524 2.9 18.1 1.0
HB2 A:CYS127 3.2 17.6 1.0
O A:HOH584 3.3 19.6 0.3
NE2 A:HIS115 3.3 13.9 1.0
HB1 A:ALA119 3.4 28.7 1.0
HA A:ALA119 3.4 22.4 1.0
CB A:ALA119 3.5 23.9 1.0
O A:HOH444 3.6 17.5 1.0
SG A:CYS127 3.7 13.9 1.0
HE1 A:HIS115 3.7 17.9 1.0
CE1 A:HIS115 3.8 14.9 1.0
CB A:CYS127 3.8 14.7 1.0
CA A:ALA119 4.0 18.7 1.0
O A:HOH368 4.1 42.4 1.0
O A:HOH473 4.1 26.7 1.0
HB3 A:CYS127 4.3 17.6 1.0
CD2 A:HIS115 4.3 12.5 1.0
HB3 A:ALA119 4.4 28.7 1.0
HD2 A:HIS115 4.6 15.0 1.0
N A:ALA119 4.7 16.9 1.0
H A:ALA119 4.8 20.2 1.0
ND1 A:HIS115 4.8 12.7 1.0
HA A:ALA124 4.9 16.1 1.0
HA A:CYS127 5.0 13.4 1.0

Reference:

E.De Meulenaere, J.B.Bailey, F.A.Tezcan, D.D.Deheyn. First Biochemical and Crystallographic Characterization of A Fast-Performing Ferritin From A Marine Invertebrate. Biochem. J. V. 474 4193 2017.
ISSN: ESSN 1470-8728
PubMed: 29127253
DOI: 10.1042/BCJ20170681
Page generated: Fri Jul 26 20:38:10 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy