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Chlorine in PDB 5wt2: Nifs From Helicobacter Pylori

Enzymatic activity of Nifs From Helicobacter Pylori

All present enzymatic activity of Nifs From Helicobacter Pylori:
2.8.1.7;

Protein crystallography data

The structure of Nifs From Helicobacter Pylori, PDB code: 5wt2 was solved by T.Fujishiro, Y.Takahashi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.55 / 2.30
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 103.010, 103.010, 133.650, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 23.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Nifs From Helicobacter Pylori (pdb code 5wt2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Nifs From Helicobacter Pylori, PDB code: 5wt2:

Chlorine binding site 1 out of 1 in 5wt2

Go back to Chlorine Binding Sites List in 5wt2
Chlorine binding site 1 out of 1 in the Nifs From Helicobacter Pylori


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Nifs From Helicobacter Pylori within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:77.7
occ:1.00
O A:PRO226 3.2 62.1 1.0
CA A:LEU227 3.9 52.0 1.0
CD1 A:LEU227 4.0 53.2 1.0
C A:PRO226 4.1 62.9 1.0
N A:LEU227 4.4 57.5 1.0
CG2 A:THR225 4.5 63.6 1.0
CE1 A:HIS229 4.5 68.2 1.0
O A:LEU227 4.6 59.3 1.0
O A:THR225 4.6 72.6 1.0
CE2 A:PHE86 4.7 77.3 1.0
CD2 A:PHE86 4.7 77.7 1.0
CB A:LEU227 4.7 50.7 1.0
C A:LEU227 4.7 54.2 1.0
ND1 A:HIS229 4.9 62.1 1.0
CG A:LEU227 4.9 57.4 1.0

Reference:

R.Nakamura, M.Hikita, S.Ogawa, Y.Takahashi, T.Fujishiro. Snapshots of Plp-Substrate and Plp-Product External Aldimines As Intermediates in Two Types of Cysteine Desulfurase Enzymes. Febs J. 2019.
ISSN: ISSN 1742-464X
PubMed: 31587510
DOI: 10.1111/FEBS.15081
Page generated: Sat Jul 12 10:25:40 2025

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