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Chlorine in PDB 5xje: Crystal Structure of Fucosylated IGG1 Fc Complexed with Bis- Glycosylated Soluble Form of Fc Gamma Receptor Iiia

Protein crystallography data

The structure of Crystal Structure of Fucosylated IGG1 Fc Complexed with Bis- Glycosylated Soluble Form of Fc Gamma Receptor Iiia, PDB code: 5xje was solved by Y.Sakae, T.Satoh, H.Yagi, S.Yanaka, T.Yamaguchi, Y.Isoda, S.Iida, Y.Okamoto, K.Kato, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.40
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.550, 77.550, 351.890, 90.00, 90.00, 90.00
R / Rfree (%) 23.3 / 28.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Fucosylated IGG1 Fc Complexed with Bis- Glycosylated Soluble Form of Fc Gamma Receptor Iiia (pdb code 5xje). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Fucosylated IGG1 Fc Complexed with Bis- Glycosylated Soluble Form of Fc Gamma Receptor Iiia, PDB code: 5xje:

Chlorine binding site 1 out of 1 in 5xje

Go back to Chlorine Binding Sites List in 5xje
Chlorine binding site 1 out of 1 in the Crystal Structure of Fucosylated IGG1 Fc Complexed with Bis- Glycosylated Soluble Form of Fc Gamma Receptor Iiia


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Fucosylated IGG1 Fc Complexed with Bis- Glycosylated Soluble Form of Fc Gamma Receptor Iiia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1010

b:64.5
occ:1.00
O A:HOH1136 3.7 48.3 1.0
CD1 A:PHE243 4.0 47.1 1.0
C3 A:NAG1007 4.0 57.9 1.0
N2 A:NAG1007 4.0 60.1 1.0
O A:HOH1137 4.2 63.1 1.0
C2 A:NAG1007 4.5 59.5 1.0
CE1 A:PHE243 4.6 49.1 1.0
O3 A:NAG1007 4.7 55.8 1.0
CD A:PRO244 4.8 51.7 1.0
C1 A:NAG1007 4.8 56.6 1.0
O4 A:NAG1007 4.9 65.8 1.0
CG A:PHE243 4.9 48.2 1.0
NZ A:LYS246 5.0 64.9 1.0
CB A:PHE243 5.0 46.0 1.0
C4 A:NAG1007 5.0 59.9 1.0

Reference:

Y.Sakae, T.Satoh, H.Yagi, S.Yanaka, T.Yamaguchi, Y.Isoda, S.Iida, Y.Okamoto, K.Kato. Conformational Effects of N-Glycan Core Fucosylation of Immunoglobulin G Fc Region on Its Interaction with Fc Gamma Receptor Iiia. Sci Rep V. 7 13780 2017.
ISSN: ESSN 2045-2322
PubMed: 29062024
DOI: 10.1038/S41598-017-13845-8
Page generated: Fri Jul 26 21:02:44 2024

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