Chlorine in PDB 5y00: Acid-Tolerant Monomeric Gfp, Gamillus, Fluorescence (on) State

The structure of Acid-Tolerant Monomeric Gfp, Gamillus, Fluorescence (on) State, PDB code: 5y00 was solved by R.Nakashima, K.Sakurai, H.Shinoda, T.Matsuda, T.Nagai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	113.96 / 1.60
Space group	I 21 3
Cell size a, b, c (Å), α, β, γ (°)	161.158, 161.158, 161.158, 90.00, 90.00, 90.00
R / Rfree (%)	14.5 / 15.8

The binding sites of Chlorine atom in the Acid-Tolerant Monomeric Gfp, Gamillus, Fluorescence (on) State (pdb code 5y00). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Acid-Tolerant Monomeric Gfp, Gamillus, Fluorescence (on) State, PDB code: 5y00:

Chlorine binding site 1 out of 1 in the Acid-Tolerant Monomeric Gfp, Gamillus, Fluorescence (on) State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Acid-Tolerant Monomeric Gfp, Gamillus, Fluorescence (on) State within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:17.1 occ:1.00 O A:HOH661 2.8 36.9 1.0 O A:HOH461 3.0 12.2 1.0 O A:HOH592 3.2 20.0 1.0 N A:TRP62 3.2 10.5 1.0 CD1 A:TRP62 3.8 12.8 1.0 CA A:SER61 3.8 12.7 1.0 CB A:LYS142 3.9 18.2 1.0 CB A:TRP62 3.9 10.7 1.0 C A:SER61 4.0 11.3 1.0 CA A:TRP62 4.1 9.9 1.0 OG A:SER61 4.2 11.7 1.0 CG A:TRP62 4.2 10.9 1.0 O A:HOH580 4.3 28.1 1.0 CG A:LYS142 4.3 18.5 1.0 O A:HOH529 4.4 22.0 1.0 CB A:SER61 4.5 12.9 1.0 CA A:LYS142 4.6 15.3 1.0 O A:HOH525 4.6 19.1 1.0 N A:VAL63 4.7 10.3 1.0 O A:LYS142 4.7 16.4 1.0 O A:MET60 4.7 11.7 1.0 CD A:LYS142 4.7 24.3 1.0 N A:SER61 4.9 12.4 1.0 C A:TRP62 5.0 9.3 1.0 C A:LYS142 5.0 15.1 1.0

H.Shinoda, Y.Ma, R.Nakashima, K.Sakurai, T.Matsuda, T.Nagai. Acid-Tolerant Monomeric Gfp From Olindias Formosa. Cell Chem Biol V. 25 330 2018.
ISSN: ESSN 2451-9448
PubMed: 29290624
DOI: 10.1016/J.CHEMBIOL.2017.12.005