Atomistry » Chlorine » PDB 5xvg-5y7d » 5y2i
Atomistry »
  Chlorine »
    PDB 5xvg-5y7d »
      5y2i »

Chlorine in PDB 5y2i: Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A

Enzymatic activity of Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A

All present enzymatic activity of Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A:
5.4.2.11; 5.4.2.4;

Protein crystallography data

The structure of Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A, PDB code: 5y2i was solved by L.Jiang, L.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.57 / 1.92
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.762, 85.036, 102.480, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 21.4

Other elements in 5y2i:

The structure of Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A (pdb code 5y2i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A, PDB code: 5y2i:

Chlorine binding site 1 out of 1 in 5y2i

Go back to Chlorine Binding Sites List in 5y2i
Chlorine binding site 1 out of 1 in the Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi- 004A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:28.3
occ:1.00
NH2 B:ARG83 3.1 25.7 1.0
NH1 B:ARG83 3.3 26.0 1.0
NH2 C:ARG83 3.3 23.9 1.0
NH1 C:ARG83 3.4 23.3 1.0
NE1 B:TRP68 3.4 23.3 1.0
NE1 C:TRP68 3.4 25.8 1.0
CZ B:ARG83 3.7 25.8 1.0
CZ C:ARG83 3.8 28.0 1.0
CG2 C:VAL81 4.0 25.0 1.0
CG2 B:VAL81 4.1 25.6 1.0
CB C:VAL81 4.1 26.9 1.0
CB B:VAL81 4.1 24.9 1.0
CD1 C:TRP68 4.2 25.9 1.0
CD1 B:TRP68 4.2 24.4 1.0
CE2 B:TRP68 4.3 24.8 1.0
CE2 C:TRP68 4.3 24.4 1.0
CG1 C:VAL81 4.4 26.5 1.0
CG1 B:VAL81 4.4 25.6 1.0
CZ2 B:TRP68 4.6 27.7 1.0
CZ2 C:TRP68 4.6 26.2 1.0
NE B:ARG83 5.0 24.0 1.0

Reference:

L.Jiang, L.Zhou. Phosphoglycerate Mutase 1 (PGAM1) Complexed with Its Inhibitor Pgmi-004A To Be Published.
Page generated: Fri Jul 26 21:16:38 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy