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Chlorine in PDB 5y2x: Crystal Structure of Apo-Halotag (M175C)

Enzymatic activity of Crystal Structure of Apo-Halotag (M175C)

All present enzymatic activity of Crystal Structure of Apo-Halotag (M175C):
3.8.1.5;

Protein crystallography data

The structure of Crystal Structure of Apo-Halotag (M175C), PDB code: 5y2x was solved by H.Lee, M.Kang, H.Rhee, C.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.44 / 2.02
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.642, 62.642, 164.192, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 19.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Apo-Halotag (M175C) (pdb code 5y2x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Apo-Halotag (M175C), PDB code: 5y2x:

Chlorine binding site 1 out of 1 in 5y2x

Go back to Chlorine Binding Sites List in 5y2x
Chlorine binding site 1 out of 1 in the Crystal Structure of Apo-Halotag (M175C)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Apo-Halotag (M175C) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:30.0
occ:1.00
NE1 A:TRP107 3.3 14.5 1.0
ND2 A:ASN41 3.3 16.0 1.0
N A:PRO206 3.4 14.9 1.0
CA A:PRO206 3.5 17.0 1.0
O A:HOH592 3.6 37.3 1.0
C A:PHE205 3.7 10.7 1.0
CD A:PRO206 3.7 13.8 1.0
CD1 A:TRP107 3.8 12.2 1.0
CB A:PHE205 3.8 13.6 1.0
CB A:PRO206 3.8 15.7 1.0
CZ A:PHE168 3.9 18.4 1.0
CD1 A:LEU209 4.0 21.0 1.0
O A:PHE205 4.0 14.7 1.0
CB A:ASN41 4.1 13.8 1.0
CG A:LEU209 4.2 17.5 1.0
CG A:ASN41 4.2 14.6 1.0
CG A:PRO206 4.3 15.4 1.0
CD2 A:LEU209 4.4 16.9 1.0
CE2 A:PHE149 4.4 23.9 1.0
CA A:PHE205 4.4 13.2 1.0
CE2 A:PHE168 4.5 15.8 1.0
CE2 A:TRP107 4.5 10.2 1.0
CG A:PHE205 4.8 10.6 1.0
CE1 A:PHE168 4.8 22.3 1.0
C A:PRO206 5.0 17.4 1.0

Reference:

M.G.Kang, H.Lee, B.H.Kim, Y.Dunbayev, J.K.Seo, C.Lee, H.W.Rhee. Structure-Guided Synthesis of A Protein-Based Fluorescent Sensor For Alkyl Halides Chem. Commun. (Camb.) V. 53 9226 2017.
ISSN: ESSN 1364-548X
PubMed: 28766590
DOI: 10.1039/C7CC03714G
Page generated: Sat Jul 12 10:50:50 2025

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