Chlorine in PDB 5ykg: Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A)

The binding sites of Chlorine atom in the Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A) (pdb code 5ykg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A), PDB code: 5ykg:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl2001 b:0.3 occ:1.00 CL1 B:GBM2001 0.0 0.3 1.0 C31 B:GBM2001 1.8 0.2 1.0 NH2 B:ARG306 2.7 0.5 1.0 C29 B:GBM2001 2.8 0.5 1.0 C32 B:GBM2001 2.8 0.4 1.0 OD1 B:ASN437 3.1 0.0 1.0 NE B:ARG306 3.3 0.5 1.0 CZ B:ARG306 3.4 0.5 1.0 CG B:ASN437 3.4 0.6 1.0 ND2 B:ASN437 3.8 0.1 1.0 C27 B:GBM2001 4.1 0.5 1.0 C30 B:GBM2001 4.1 0.5 1.0 CD1 B:LEU592 4.2 0.3 1.0 CB B:ASN437 4.2 0.5 1.0 OH B:TYR377 4.4 0.2 1.0 C28 B:GBM2001 4.6 0.3 1.0 CD B:ARG306 4.6 0.5 1.0 NH1 B:ARG306 4.7 0.5 1.0 CE1 B:TYR377 4.7 85.3 1.0 CA B:ASN437 4.8 0.3 1.0 CE B:MET441 4.9 0.9 1.0

Chlorine binding site 2 out of 4 in the Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A) within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl2001 b:0.3 occ:1.00 CL1 D:GBM2001 0.0 0.3 1.0 C31 D:GBM2001 1.8 0.2 1.0 NH2 D:ARG306 2.7 0.5 1.0 C29 D:GBM2001 2.8 0.5 1.0 C32 D:GBM2001 2.8 0.4 1.0 OD1 D:ASN437 3.1 0.0 1.0 NE D:ARG306 3.3 0.5 1.0 CZ D:ARG306 3.4 0.5 1.0 CG D:ASN437 3.4 0.6 1.0 ND2 D:ASN437 3.8 0.1 1.0 C27 D:GBM2001 4.1 0.5 1.0 C30 D:GBM2001 4.1 0.5 1.0 CD1 D:LEU592 4.2 0.3 1.0 CB D:ASN437 4.2 0.5 1.0 OH D:TYR377 4.4 0.2 1.0 C28 D:GBM2001 4.6 0.3 1.0 CD D:ARG306 4.6 0.5 1.0 NH1 D:ARG306 4.7 0.5 1.0 CE1 D:TYR377 4.7 85.3 1.0 CA D:ASN437 4.8 0.3 1.0 CE D:MET441 4.9 0.9 1.0

Chlorine binding site 3 out of 4 in the Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A) within 5.0Å range: probe atom residue distance (Å) B Occ F:Cl2001 b:0.3 occ:1.00 CL1 F:GBM2001 0.0 0.3 1.0 C31 F:GBM2001 1.8 0.2 1.0 NH2 F:ARG306 2.7 0.5 1.0 C29 F:GBM2001 2.8 0.5 1.0 C32 F:GBM2001 2.8 0.4 1.0 OD1 F:ASN437 3.1 0.0 1.0 NE F:ARG306 3.3 0.5 1.0 CZ F:ARG306 3.4 0.5 1.0 CG F:ASN437 3.4 0.6 1.0 ND2 F:ASN437 3.8 0.1 1.0 C27 F:GBM2001 4.1 0.5 1.0 C30 F:GBM2001 4.1 0.5 1.0 CD1 F:LEU592 4.2 0.3 1.0 CB F:ASN437 4.2 0.5 1.0 OH F:TYR377 4.4 0.2 1.0 C28 F:GBM2001 4.6 0.3 1.0 CD F:ARG306 4.6 0.5 1.0 NH1 F:ARG306 4.7 0.5 1.0 CE1 F:TYR377 4.7 85.3 1.0 CA F:ASN437 4.8 0.3 1.0 CE F:MET441 4.9 0.9 1.0

Chlorine binding site 4 out of 4 in the Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of Pancreatic Atp-Sensitive Potassium Channel Bound with Glibenclamide and Atpgammas (CLASS2 at 4.57A) within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl2001 b:0.3 occ:1.00 CL1 H:GBM2001 0.0 0.3 1.0 C31 H:GBM2001 1.8 0.2 1.0 NH2 H:ARG306 2.7 0.5 1.0 C29 H:GBM2001 2.8 0.5 1.0 C32 H:GBM2001 2.8 0.4 1.0 OD1 H:ASN437 3.1 0.0 1.0 NE H:ARG306 3.3 0.5 1.0 CZ H:ARG306 3.4 0.5 1.0 CG H:ASN437 3.4 0.6 1.0 ND2 H:ASN437 3.8 0.1 1.0 C27 H:GBM2001 4.1 0.5 1.0 C30 H:GBM2001 4.1 0.5 1.0 CD1 H:LEU592 4.2 0.3 1.0 CB H:ASN437 4.2 0.5 1.0 OH H:TYR377 4.4 0.2 1.0 C28 H:GBM2001 4.6 0.3 1.0 CD H:ARG306 4.6 0.5 1.0 NH1 H:ARG306 4.7 0.5 1.0 CE1 H:TYR377 4.7 85.3 1.0 CA H:ASN437 4.8 0.3 1.0 CE H:MET441 4.9 0.9 1.0

J.X.Wu, D.Ding, M.Wang, Y.Kang, X.Zeng, L.Chen. Ligand Binding and Conformational Changes of SUR1 Subunit in Pancreatic Atp-Sensitive Potassium Channels. Protein Cell V. 9 553 2018.
ISSN: ESSN 1674-8018
PubMed: 29594720
DOI: 10.1007/S13238-018-0530-Y