Atomistry » Chlorine » PDB 6cub-6d3h » 6czp
Atomistry »
  Chlorine »
    PDB 6cub-6d3h »
      6czp »

Chlorine in PDB 6czp: 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn

Protein crystallography data

The structure of 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn, PDB code: 6czp was solved by G.Minasov, Z.Wawrzak, T.Skarina, S.Grimshaw, K.Kwon, A.Savchenko, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 2.24
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 118.769, 119.659, 131.175, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 22.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn (pdb code 6czp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn, PDB code: 6czp:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6czp

Go back to Chlorine Binding Sites List in 6czp
Chlorine binding site 1 out of 3 in the 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:57.3
occ:1.00
ND2 C:ASN115 3.0 52.3 1.0
CB C:ASN115 3.6 49.8 1.0
CG C:ASN115 3.8 50.6 1.0
CA C:GLU112 4.1 60.3 1.0
O C:VAL111 4.5 56.1 1.0
O C:GLU112 4.7 56.3 1.0
N C:GLU112 4.7 59.5 1.0
CB C:GLU112 4.7 64.5 1.0
CG C:GLU112 4.7 66.1 1.0
C C:VAL111 4.8 57.1 1.0
C C:GLU112 4.9 57.8 1.0
CA C:ASN115 5.0 49.9 1.0
OD1 C:ASN115 5.0 47.5 1.0

Chlorine binding site 2 out of 3 in 6czp

Go back to Chlorine Binding Sites List in 6czp
Chlorine binding site 2 out of 3 in the 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl302

b:53.6
occ:1.00
N D:ILE90 3.3 35.1 1.0
O D:HOH457 3.4 67.1 1.0
CA D:ALA89 3.6 34.1 1.0
O D:ILE90 3.6 35.7 1.0
CB D:ALA89 3.8 34.6 1.0
CB D:ALA135 3.9 35.3 1.0
C D:ALA89 4.0 34.4 1.0
CG2 D:ILE90 4.1 34.2 1.0
CG D:ARG129 4.2 32.7 1.0
NE D:ARG129 4.3 35.8 1.0
CA D:ILE90 4.3 34.6 1.0
C D:ILE90 4.4 36.5 1.0
CD D:ARG129 4.7 34.8 1.0
CB D:ILE90 4.8 34.9 1.0
O D:HOH454 4.8 40.6 1.0
O D:THR88 4.8 34.8 1.0
O D:HOH447 4.8 46.5 1.0
CB D:ARG129 4.9 31.4 1.0
N D:ALA89 4.9 33.1 1.0

Chlorine binding site 3 out of 3 in 6czp

Go back to Chlorine Binding Sites List in 6czp
Chlorine binding site 3 out of 3 in the 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H- Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl302

b:66.3
occ:1.00
N G:GLU92 3.1 41.7 1.0
NH1 G:ARG129 3.4 33.8 1.0
CB G:GLU92 3.5 48.2 1.0
CB G:ASP91 3.6 42.1 1.0
CA G:ASP91 3.9 40.6 1.0
CA G:GLU92 3.9 44.3 1.0
NH2 G:ARG129 3.9 34.0 1.0
O A:HOH403 4.0 53.2 1.0
C G:ASP91 4.0 40.6 1.0
CZ G:ARG129 4.1 35.5 1.0
CG G:ASP91 4.7 43.0 1.0
OE2 A:GLU55 4.8 52.6 1.0
CG G:GLU92 4.9 53.5 1.0
O G:HOH424 4.9 62.0 1.0

Reference:

G.Minasov, Z.Wawrzak, T.Skarina, S.Grimshaw, K.Kwon, A.Savchenko, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive Nad(P)H-Dependent Nitroreductase Nfsb From Vibrio Vulnificus in Complex with Fmn. To Be Published.
Page generated: Sat Jul 27 21:14:02 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy