Chlorine in PDB 6d2v: Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway

The structure of Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway, PDB code: 6d2v was solved by J.A.Clinger, S.I.Elshahawi, Y.Zhang, R.P.Hall, Y.Liu, J.S.Thorson, G.N.Phillips Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.72 / 1.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	58.516, 80.598, 139.518, 90.00, 90.00, 90.00
R / Rfree (%)	16.1 / 19.8

The binding sites of Chlorine atom in the Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway (pdb code 6d2v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway, PDB code: 6d2v:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl403 b:18.6 occ:1.00 H A:GLY39 2.5 30.0 1.0 H A:LYS42 2.9 26.9 1.0 HA2 A:GLY39 2.9 29.8 1.0 HB3 A:GLU41 3.2 24.3 1.0 N A:GLY39 3.2 25.0 1.0 O A:HOH656 3.4 27.9 1.0 CA A:GLY39 3.4 24.8 1.0 H A:GLU41 3.5 23.7 1.0 HB2 A:LYS42 3.6 34.6 1.0 HB3 A:LYS42 3.6 34.6 1.0 N A:LYS42 3.7 22.4 1.0 C A:GLY39 3.8 24.9 1.0 CB A:LYS42 4.0 28.8 1.0 N A:GLU41 4.0 19.7 1.0 CB A:GLU41 4.1 20.3 1.0 N A:VAL40 4.2 23.5 1.0 O A:GLY39 4.2 27.0 1.0 H A:VAL40 4.3 28.2 1.0 HA A:PRO38 4.3 30.5 1.0 HA3 A:GLY39 4.3 29.8 1.0 HB2 A:GLU41 4.4 24.3 1.0 CA A:GLU41 4.4 23.9 1.0 CA A:LYS42 4.4 22.3 1.0 C A:PRO38 4.5 23.9 1.0 C A:GLU41 4.5 24.6 1.0 HA A:LYS42 4.8 26.7 1.0 CA A:PRO38 4.9 25.4 1.0 C A:VAL40 4.9 19.5 1.0

Chlorine binding site 2 out of 2 in the Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Apo Structure of Terb, An Nadp Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl404 b:43.9 occ:1.00 HG3 A:ARG81 2.6 68.4 1.0 HA A:ARG81 2.7 80.3 1.0 HB3 A:ALA144 3.1 49.6 1.0 O A:HOH509 3.2 42.4 1.0 CG A:ARG81 3.4 57.0 1.0 CA A:ARG81 3.4 66.9 1.0 HG2 A:ARG81 3.6 68.4 1.0 H A:GLY82 3.7 69.8 1.0 CB A:ARG81 3.7 48.7 1.0 HB2 A:ARG81 3.7 58.4 1.0 HB2 A:ALA90 3.7 44.2 1.0 C A:ARG81 3.8 78.1 1.0 HB2 A:TYR145 3.8 36.3 1.0 N A:GLY82 3.8 58.2 1.0 HA A:TYR145 3.9 38.2 1.0 HG A:LEU142 3.9 92.8 1.0 CB A:ALA144 3.9 41.4 1.0 HB1 A:ALA144 4.0 49.6 1.0 O A:HOH518 4.2 47.1 1.0 HB1 A:ALA90 4.2 44.2 1.0 N A:TYR145 4.3 27.7 1.0 HA A:GLU83 4.4 0.4 1.0 C A:ALA144 4.4 32.0 1.0 CB A:ALA90 4.4 36.9 1.0 CA A:TYR145 4.4 31.8 1.0 H A:TYR145 4.5 33.2 1.0 C A:GLY82 4.5 0.4 1.0 O A:HOH692 4.5 47.4 1.0 HD21 A:LEU142 4.5 70.4 1.0 O A:GLY82 4.6 79.3 1.0 CB A:TYR145 4.6 30.3 1.0 HB2 A:ALA144 4.6 49.6 1.0 O A:ARG81 4.6 77.1 1.0 HB3 A:ARG81 4.6 58.4 1.0 O A:ARG80 4.6 41.9 1.0 CD A:ARG81 4.7 41.6 1.0 N A:ARG81 4.7 53.3 1.0 CA A:ALA144 4.7 42.3 1.0 CG A:LEU142 4.7 77.3 1.0 N A:GLU83 4.8 0.6 1.0 CA A:GLY82 4.8 0.8 1.0 O A:ALA144 4.8 26.6 1.0 HD3 A:ARG81 4.8 49.9 1.0 HD2 A:ARG81 4.8 49.9 1.0 HD11 A:LEU142 4.9 81.5 1.0 HD1 A:TYR145 4.9 40.2 1.0 HD23 A:LEU142 4.9 70.4 1.0 H A:ALA144 4.9 48.2 1.0 HB3 A:ALA90 4.9 44.2 1.0 CD2 A:LEU142 4.9 58.7 1.0

J.A.Clinger, S.I.Elshahawi, Y.Zhang, R.P.Hall, Y.Liu, M.D.Miller, J.S.Thorson, G.N.Phillips Jr.. Structure and Function of Terfestatin Biosynthesis Enzymes Terb and Terc To Be Published.