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Chlorine in PDB 6djc: Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645

Protein crystallography data

The structure of Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645, PDB code: 6djc was solved by C.Ren, M.M.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.32 / 1.46
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.000, 59.720, 95.620, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 17.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645 (pdb code 6djc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645, PDB code: 6djc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6djc

Go back to Chlorine Binding Sites List in 6djc
Chlorine binding site 1 out of 2 in the Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:14.8
occ:1.00
CL1 A:CF6501 0.0 14.8 1.0
C45 A:CF6501 1.8 10.0 1.0
C44 A:CF6501 2.7 9.7 1.0
C46 A:CF6501 2.7 14.8 1.0
O A:HOH633 3.3 13.2 1.0
C20 A:CF6501 3.9 12.8 1.0
C43 A:CF6501 4.0 9.6 1.0
C47 A:CF6501 4.0 14.5 1.0
CD2 A:LEU92 4.1 16.2 1.0
C18 A:CF6501 4.2 13.3 1.0
C42 A:CF6501 4.5 10.8 1.0
C31 A:CF6501 4.7 13.8 1.0
O A:HOH613 4.7 22.3 1.0
C19 A:CF6501 4.8 10.6 1.0
O1 A:CF6501 4.8 10.0 1.0

Chlorine binding site 2 out of 2 in 6djc

Go back to Chlorine Binding Sites List in 6djc
Chlorine binding site 2 out of 2 in the Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Bromodomain-Containing Protein 4 (BRD4) Bromodomain with MS645 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:13.6
occ:1.00
CL A:CF6501 0.0 13.6 1.0
C38 A:CF6501 1.8 10.1 1.0
C39 A:CF6501 2.7 8.8 1.0
C37 A:CF6501 2.8 12.0 1.0
SD A:MET149 3.8 13.4 1.0
C14 A:CF6501 4.0 15.6 1.0
C40 A:CF6501 4.0 7.6 1.0
O A:HOH653 4.0 14.1 1.0
C15 A:CF6501 4.0 14.3 1.0
C36 A:CF6501 4.0 11.1 1.0
CB A:ASP145 4.1 9.0 1.0
O1 A:EDO507 4.2 22.9 1.0
C1 A:EDO507 4.3 23.9 1.0
C16 A:CF6501 4.3 14.9 1.0
OD2 A:ASP145 4.4 26.9 1.0
C35 A:CF6501 4.5 7.7 1.0
C13 A:CF6501 4.6 18.1 1.0
CE A:MET149 4.7 14.1 1.0
CG A:ASP145 4.7 15.9 1.0
C17 A:CF6501 5.0 12.1 1.0

Reference:

C.Ren, G.Zhang, F.Han, S.Fu, Y.Cao, F.Zhang, Q.Zhang, J.Meslamani, Y.Xu, D.Ji, L.Cao, Q.Zhou, K.L.Cheung, R.Sharma, N.Babault, Z.Yi, W.Zhang, M.J.Walsh, L.Zeng, M.M.Zhou. Spatially Constrained Tandem Bromodomain Inhibition Bolsters Sustained Repression of BRD4 Transcriptional Activity For Tnbc Cell Growth. Proc. Natl. Acad. Sci. V. 115 7949 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30012592
DOI: 10.1073/PNAS.1720000115
Page generated: Sat Jul 12 12:50:54 2025

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