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Chlorine in PDB 6ds8: Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site

Enzymatic activity of Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site

All present enzymatic activity of Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site:
1.14.14.18;

Protein crystallography data

The structure of Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site, PDB code: 6ds8 was solved by A.Chao, C.W.Goulding, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.50 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.020, 68.701, 74.490, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 24.2

Other elements in 6ds8:

The structure of Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site (pdb code 6ds8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site, PDB code: 6ds8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6ds8

Go back to Chlorine Binding Sites List in 6ds8
Chlorine binding site 1 out of 2 in the Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:25.1
occ:1.00
MN A:MNH202 2.5 25.7 1.0
ND2 A:ASN7 3.4 25.1 1.0
ND A:MNH202 3.5 25.1 1.0
NB A:MNH202 3.5 22.2 1.0
CG2 A:VAL53 3.5 18.1 1.0
NC A:MNH202 3.6 23.5 1.0
NA A:MNH202 3.6 23.6 1.0
CZ A:PHE23 3.6 20.2 1.0
CG2 A:ILE9 3.9 28.8 1.0
CB A:ASN7 3.9 19.9 1.0
C4B A:MNH202 4.1 25.4 1.0
CB A:VAL53 4.1 23.0 1.0
C1A A:MNH202 4.1 25.1 1.0
C4D A:MNH202 4.1 27.2 1.0
CG A:ASN7 4.2 27.0 1.0
C1C A:MNH202 4.2 25.3 1.0
CHC A:MNH202 4.2 23.6 1.0
C1D A:MNH202 4.2 25.8 1.0
CD1 A:ILE9 4.2 36.7 1.0
CHA A:MNH202 4.2 20.6 1.0
CHD A:MNH202 4.3 22.1 1.0
C4C A:MNH202 4.3 26.9 1.0
C4A A:MNH202 4.3 25.4 1.0
CG1 A:VAL53 4.4 20.9 1.0
C1B A:MNH202 4.4 23.9 1.0
CE2 A:PHE23 4.4 19.7 1.0
CHB A:MNH202 4.5 21.7 1.0
CE1 A:PHE23 4.5 22.1 1.0
O A:ASN7 5.0 20.6 1.0

Chlorine binding site 2 out of 2 in 6ds8

Go back to Chlorine Binding Sites List in 6ds8
Chlorine binding site 2 out of 2 in the Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:25.7
occ:1.00
MN B:MNH202 2.5 26.3 1.0
ND2 B:ASN7 3.0 22.3 1.0
CG2 B:VAL53 3.4 18.6 1.0
ND B:MNH202 3.4 19.9 1.0
NC B:MNH202 3.5 20.9 1.0
NA B:MNH202 3.5 25.5 1.0
CG2 B:ILE9 3.6 32.7 1.0
NB B:MNH202 3.6 23.2 1.0
CZ B:PHE23 3.7 21.8 1.0
CB B:ASN7 3.9 21.0 1.0
CG B:ASN7 3.9 24.1 1.0
CD1 B:ILE9 4.0 32.8 1.0
CB B:VAL53 4.1 21.1 1.0
C4D B:MNH202 4.1 23.1 1.0
C1D B:MNH202 4.1 24.5 1.0
C1A B:MNH202 4.1 27.1 1.0
CHA B:MNH202 4.2 24.5 1.0
C4B B:MNH202 4.2 24.9 1.0
C1C B:MNH202 4.2 26.4 1.0
CHD B:MNH202 4.2 21.9 1.0
C4C B:MNH202 4.2 23.3 1.0
CHC B:MNH202 4.3 21.9 1.0
C4A B:MNH202 4.3 28.5 1.0
C1B B:MNH202 4.4 26.4 1.0
CE2 B:PHE23 4.4 23.9 1.0
CHB B:MNH202 4.5 24.9 1.0
CG1 B:VAL53 4.5 15.9 1.0
CG1 B:ILE9 4.5 31.1 1.0
CB B:ILE9 4.7 31.1 1.0
CE1 B:PHE23 4.7 23.5 1.0
O B:ASN7 4.9 23.7 1.0

Reference:

A.Chao, C.W.Goulding. Crystal Structure of Mhud R26S Mutant with Two Manganese Protoporphyrin IX Bound Per Active Site To Be Published.
Page generated: Sat Jul 12 13:00:54 2025

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