Atomistry » Chlorine » PDB 6dox-6dy2 » 6dt4
Atomistry »
  Chlorine »
    PDB 6dox-6dy2 »
      6dt4 »

Chlorine in PDB 6dt4: 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp

Protein crystallography data

The structure of 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp, PDB code: 6dt4 was solved by G.Minasov, L.Shuvalova, O.Kiryukhina, J.T.H.Ritzert, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.61 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.876, 82.800, 106.350, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp (pdb code 6dt4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp, PDB code: 6dt4:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 6dt4

Go back to Chlorine Binding Sites List in 6dt4
Chlorine binding site 1 out of 5 in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:28.5
occ:0.40
OE1 A:GLU35 2.1 42.4 0.6
O A:HOH456 2.9 40.5 1.0
N A:HIS32 2.9 26.6 0.5
N A:HIS32 2.9 26.6 0.5
CD A:GLU35 3.2 41.2 0.6
O A:HOH452 3.2 53.2 1.0
CB A:GLU35 3.5 36.2 0.6
CB A:GLU35 3.6 37.1 0.4
O A:HIS32 3.6 25.4 0.5
O A:HIS32 3.6 25.1 0.5
ND1 A:HIS32 3.7 31.4 0.5
CB A:HIS32 3.7 29.7 0.5
CA A:ILE31 3.7 26.0 1.0
CA A:HIS32 3.8 27.4 0.5
CG A:GLU35 3.8 38.9 0.6
CA A:HIS32 3.8 27.4 0.5
C A:ILE31 3.8 25.6 1.0
O A:HOH424 3.8 38.9 0.5
CB A:HIS32 3.8 29.6 0.5
CG A:GLU35 4.0 39.2 0.4
CD2 A:HIS32 4.1 31.9 0.5
C A:HIS32 4.2 26.1 0.5
C A:HIS32 4.2 26.2 0.5
OE2 A:GLU35 4.2 45.6 0.6
CG A:HIS32 4.2 31.0 0.5
CG A:HIS32 4.3 31.1 0.5
CG2 A:ILE31 4.3 25.3 1.0
CG A:ARG83 4.5 25.6 1.0
CB A:ILE31 4.5 25.5 1.0
O A:LEU30 4.5 27.4 1.0
O A:HOH443 4.6 29.8 0.5
N A:ILE31 4.8 26.4 1.0
CE1 A:HIS32 4.8 31.7 0.5
NE A:ARG83 4.8 23.6 1.0
CA A:GLU35 4.9 34.7 0.6
CA A:GLU35 4.9 35.4 0.4
O A:ILE31 5.0 25.1 1.0

Chlorine binding site 2 out of 5 in 6dt4

Go back to Chlorine Binding Sites List in 6dt4
Chlorine binding site 2 out of 5 in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:59.5
occ:0.50
CL A:CL303 0.0 59.5 0.5
CL A:CL303 1.7 65.8 0.5
N A:ARG170 3.2 41.8 1.0
CA A:THR169 3.6 47.9 1.0
CG A:ARG170 3.7 47.3 1.0
C A:THR169 3.9 43.8 1.0
CD A:ARG170 3.9 52.5 1.0
CB A:THR169 4.0 50.1 1.0
CB A:ARG170 4.0 40.8 1.0
NZ A:LYS202 4.1 0.2 1.0
NE A:ARG170 4.1 57.0 1.0
CD A:LYS202 4.1 0.2 1.0
O A:HOH476 4.2 45.3 1.0
CA A:ARG170 4.2 38.9 1.0
O A:ILE168 4.4 58.4 1.0
NH2 A:ARG181 4.4 69.2 1.0
CG2 A:THR169 4.5 53.0 1.0
CE A:LYS202 4.7 0.7 1.0
O A:GLY201 4.7 0.4 1.0
N A:THR169 4.7 51.3 1.0
CA A:LYS202 4.8 0.9 1.0
C A:ILE168 5.0 56.0 1.0

Chlorine binding site 3 out of 5 in 6dt4

Go back to Chlorine Binding Sites List in 6dt4
Chlorine binding site 3 out of 5 in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:65.8
occ:0.50
CL A:CL303 0.0 65.8 0.5
CL A:CL303 1.7 59.5 0.5
O A:HOH476 2.7 45.3 1.0
NH2 A:ARG181 3.2 69.2 1.0
N A:ARG170 3.5 41.8 1.0
NZ A:LYS202 3.6 0.2 1.0
CB A:THR169 3.8 50.1 1.0
CA A:THR169 4.0 47.9 1.0
CB A:ARG170 4.0 40.8 1.0
CZ A:ARG181 4.1 68.0 1.0
NE A:ARG181 4.2 58.8 1.0
CG A:ARG170 4.2 47.3 1.0
CD A:ARG170 4.3 52.5 1.0
C A:THR169 4.3 43.8 1.0
CG2 A:THR169 4.3 53.0 1.0
CA A:ARG170 4.4 38.9 1.0
CD A:LYS202 4.6 0.2 1.0
CE A:LYS202 4.7 0.7 1.0
N A:GLN171 4.7 36.6 0.5
N A:GLN171 4.8 36.6 0.5
NE A:ARG170 4.8 57.0 1.0
OG1 A:THR169 4.9 47.4 1.0

Chlorine binding site 4 out of 5 in 6dt4

Go back to Chlorine Binding Sites List in 6dt4
Chlorine binding site 4 out of 5 in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:48.4
occ:0.50
CL A:CL304 0.0 48.4 0.5
CL A:CL304 1.8 42.6 0.5
CG2 A:VAL140 3.5 36.9 1.0
O A:HOH413 3.6 39.8 1.0
N A:VAL140 3.8 35.4 1.0
O B:HOH477 4.1 36.5 1.0
CA A:ASP139 4.3 37.5 1.0
CB A:VAL140 4.3 35.8 1.0
CB A:ASP139 4.5 40.6 1.0
C A:ASP139 4.5 35.4 1.0
CA A:VAL140 4.6 34.6 1.0

Chlorine binding site 5 out of 5 in 6dt4

Go back to Chlorine Binding Sites List in 6dt4
Chlorine binding site 5 out of 5 in the 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:42.6
occ:0.50
CL A:CL304 0.0 42.6 0.5
CL A:CL304 1.8 48.4 0.5
N A:VAL140 3.5 35.4 1.0
O A:HOH496 3.6 38.5 0.5
CB A:ASP139 3.6 40.6 1.0
CG2 A:VAL140 3.9 36.9 1.0
CA A:ASP139 3.9 37.5 1.0
CB A:VAL140 4.2 35.8 1.0
C A:ASP139 4.2 35.4 1.0
CA A:VAL140 4.4 34.6 1.0
CG A:ASP139 4.7 45.0 1.0
O A:HOH413 4.7 39.8 1.0

Reference:

G.Minasov, L.Shuvalova, O.Kiryukhina, J.T.H.Ritzert, W.F.Anderson, K.J.F.Satchell, A.Joachimiak. 1.8 Angstrom Resolution Crystal Structure of Camp-Regulatory Protein From Yersinia Pestis in Complex with Camp. To Be Published.
Page generated: Sat Jul 12 13:01:09 2025

Last articles

Mg in 7DPT
Mg in 7DQE
Mg in 7DQD
Mg in 7DQV
Mg in 7DPW
Mg in 7DQ8
Mg in 7DP8
Mg in 7DPJ
Mg in 7DPI
Mg in 7DPH
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy