Chlorine in PDB 6eg5: The Structure of Sb-1-202-Tubulin Complex

The structure of The Structure of Sb-1-202-Tubulin Complex, PDB code: 6eg5 was solved by A.K.Banerjee, Y.Wang, H.Chen, D.Miller, W.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.45
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	105.541, 158.033, 181.870, 90.00, 90.00, 90.00
R / Rfree (%)	19.6 / 23.6

The structure of The Structure of Sb-1-202-Tubulin Complex also contains other interesting chemical elements:

Magnesium	(Mg)	6 atoms
Calcium	(Ca)	4 atoms

The binding sites of Chlorine atom in the The Structure of Sb-1-202-Tubulin Complex (pdb code 6eg5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The Structure of Sb-1-202-Tubulin Complex, PDB code: 6eg5:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the The Structure of Sb-1-202-Tubulin Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of Sb-1-202-Tubulin Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl504 b:74.2 occ:1.00 N A:LYS163 3.2 61.4 1.0 NZ A:LYS164 3.4 65.1 1.0 N A:GLY162 3.4 45.3 1.0 C A:TYR161 3.5 44.2 1.0 CB A:LYS163 3.6 72.0 1.0 CA A:TYR161 3.7 45.5 1.0 CG A:LYS163 3.9 77.1 1.0 CA A:LYS163 3.9 66.6 1.0 O A:TYR161 4.0 47.7 1.0 C A:GLY162 4.1 52.9 1.0 CA A:GLY162 4.2 49.4 1.0 CD A:LYS163 4.4 82.7 1.0 CG A:LYS164 4.5 56.1 1.0 CE A:LYS164 4.5 62.0 1.0 N A:LYS164 4.6 57.4 1.0 CB A:TYR161 4.6 43.6 1.0 C A:LYS163 4.6 63.4 1.0 N A:TYR161 4.8 49.4 1.0 O A:ASP160 4.8 49.5 1.0 CD A:LYS164 4.9 60.0 1.0

Chlorine binding site 2 out of 3 in the The Structure of Sb-1-202-Tubulin Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of Sb-1-202-Tubulin Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl506 b:39.6 occ:1.00 CL B:J7S506 0.0 39.6 1.0 C6 B:J7S506 1.7 33.0 1.0 N1 B:J7S506 2.6 32.3 1.0 N2 B:J7S506 2.6 33.1 1.0 CD2 B:LEU240 3.3 30.8 1.0 CB B:ALA248 3.6 41.3 1.0 CG B:LEU240 3.7 32.0 1.0 C5 B:J7S506 3.8 29.1 1.0 C7 B:J7S506 3.9 31.9 1.0 O B:HOH692 3.9 40.9 1.0 CD2 B:LEU253 4.1 25.9 1.0 CB B:LEU253 4.2 25.1 1.0 CB B:CYS239 4.3 34.7 1.0 O B:VAL236 4.4 27.9 1.0 CD1 B:LEU253 4.4 25.6 1.0 CD1 B:LEU240 4.4 32.5 1.0 C8 B:J7S506 4.4 30.8 1.0 CG B:LEU253 4.4 25.5 1.0 O B:HOH607 4.6 29.7 1.0 O B:ASP249 4.6 28.1 1.0 N B:LEU240 4.6 35.2 1.0 C B:CYS239 4.7 36.2 1.0 N B:J7S506 4.9 26.8 1.0 CA B:ALA248 4.9 42.0 1.0 N B:ASP249 4.9 34.1 1.0 CB B:LEU240 4.9 33.0 1.0 C B:ALA248 4.9 35.7 1.0 N3 B:J7S506 5.0 31.7 1.0 C B:ASP249 5.0 29.1 1.0

Chlorine binding site 3 out of 3 in the The Structure of Sb-1-202-Tubulin Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Structure of Sb-1-202-Tubulin Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl603 b:48.8 occ:1.00 CL D:J7S603 0.0 48.8 1.0 C6 D:J7S603 1.8 45.6 1.0 N1 D:J7S603 2.6 42.9 1.0 N2 D:J7S603 2.7 44.5 1.0 CD2 D:LEU240 3.4 38.0 1.0 CB D:ALA248 3.6 44.1 1.0 CG D:LEU240 3.7 38.3 1.0 C5 D:J7S603 3.9 38.0 1.0 CB D:LEU253 3.9 30.2 1.0 C7 D:J7S603 4.0 42.2 1.0 CD2 D:LEU253 4.1 32.6 1.0 O D:HOH734 4.1 60.9 1.0 CD1 D:LEU253 4.2 31.4 1.0 CG D:LEU253 4.3 31.4 1.0 O D:ASP249 4.3 28.9 1.0 CB D:CYS239 4.3 44.0 1.0 N D:LEU240 4.4 40.2 1.0 O D:VAL236 4.5 47.1 1.0 C8 D:J7S603 4.5 41.0 1.0 CD1 D:LEU240 4.6 39.7 1.0 C D:CYS239 4.6 42.2 1.0 N D:ASP249 4.7 34.0 1.0 O D:HOH709 4.7 47.4 1.0 C D:ASP249 4.8 31.4 1.0 C D:ALA248 4.8 38.0 1.0 CA D:ALA248 4.9 41.6 1.0 CB D:LEU240 4.9 37.7 1.0 N D:J7S603 4.9 33.2 1.0 CA D:LEU253 4.9 28.6 1.0 CA D:CYS239 4.9 42.7 1.0 CA D:LEU240 4.9 39.6 1.0

H.Chen, Y.Wang, W.Li. The Structure of Sb-1-202/Sb-2-204-Tubulin Complex To Be Published.