Atomistry » Chlorine » PDB 6el4-6erc » 6eqe
Atomistry »
  Chlorine »
    PDB 6el4-6erc »
      6eqe »

Chlorine in PDB 6eqe: High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis

Enzymatic activity of High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis

All present enzymatic activity of High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis:
3.1.1.101;

Protein crystallography data

The structure of High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis, PDB code: 6eqe was solved by H.P.Austin, M.D.Allen, C.W.Johnson, G.T.Beckham, J.E.Mcgeehan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.51 / 0.92
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.114, 51.388, 84.545, 90.00, 90.00, 90.00
R / Rfree (%) 10 / 11

Other elements in 6eqe:

The structure of High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis (pdb code 6eqe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis, PDB code: 6eqe:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6eqe

Go back to Chlorine Binding Sites List in 6eqe
Chlorine binding site 1 out of 2 in the High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:6.7
occ:1.00
 H A:TYR87 2.4 6.8 1.0
H A:MET161 2.4 6.3 1.0
HG A:SER160 2.6 7.0 1.0
HG3 A:MET161 2.6 8.2 1.0
HB2 A:TYR87 2.8 7.3 1.0
HB3 A:SER160 2.9 6.4 1.0
OG A:SER160 3.0 5.8 1.0
O A:HOH486 3.1 12.6 1.0
HB2 A:MET161 3.2 7.0 1.0
N A:TYR87 3.3 5.7 1.0
N A:MET161 3.3 5.3 1.0
HB3 A:TYR87 3.3 7.3 1.0
CG A:MET161 3.4 6.8 1.0
CB A:SER160 3.4 5.3 1.0
CB A:TYR87 3.5 6.1 1.0
CB A:MET161 3.7 5.8 1.0
HA3 A:GLY86 3.7 6.9 1.0
HE3 A:MET161 3.8 11.9 1.0
HA2 A:GLY86 3.9 6.9 1.0
CA A:TYR87 4.0 5.7 1.0
CA A:MET161 4.1 5.4 1.0
SD A:MET161 4.1 7.7 1.0
CA A:GLY86 4.1 5.8 1.0
HB2 A:SER160 4.2 6.4 1.0
HG2 A:MET161 4.2 8.2 1.0
C A:SER160 4.2 5.0 1.0
C A:GLY86 4.2 5.3 1.0
CA A:SER160 4.4 4.9 1.0
O A:HOH527 4.4 8.7 0.5
CE A:MET161 4.4 9.9 1.0
HA A:MET161 4.5 6.5 1.0
HB3 A:MET161 4.6 7.0 1.0
HA A:TYR87 4.7 6.9 1.0
CG A:TYR87 4.7 6.4 1.0
HB3 A:TRP185 4.7 9.9 1.0
HA A:SER160 4.8 5.9 1.0
HG21 A:ILE208 4.9 9.8 1.0
NE2 A:HIS237 4.9 6.3 1.0
O A:TYR87 4.9 5.8 1.0
H A:GLY162 4.9 6.0 1.0
HE2 A:MET161 5.0 11.9 1.0

Chlorine binding site 2 out of 2 in 6eqe

Go back to Chlorine Binding Sites List in 6eqe
Chlorine binding site 2 out of 2 in the High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High Resolution Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:10.8
occ:1.00
 HG A:SER207 2.3 16.2 0.4
H A:SER207 2.4 10.0 0.4
H A:SER207 2.4 10.0 0.6
H A:HIS237 2.4 7.3 1.0
HB2 A:HIS237 2.9 7.5 1.0
O A:HOH773 3.1 21.3 0.4
O A:HOH646 3.1 25.4 0.7
HA A:ASP206 3.1 8.1 1.0
HB2 A:SER236 3.1 10.7 1.0
OG A:SER207 3.2 13.5 0.4
N A:SER207 3.2 8.3 1.0
N A:HIS237 3.2 6.1 1.0
HG12 A:ILE208 3.3 10.7 1.0
HB3 A:SER207 3.5 12.2 0.6
HB3 A:HIS237 3.5 7.5 1.0
HA A:SER236 3.5 8.1 1.0
CB A:HIS237 3.6 6.2 1.0
H A:ILE208 3.7 8.9 1.0
HB2 A:SER207 3.7 12.2 0.6
CB A:SER207 3.9 10.2 0.6
CB A:SER236 3.9 8.9 1.0
CA A:ASP206 4.0 6.8 1.0
CB A:SER207 4.0 12.2 0.4
HB3 A:SER207 4.0 14.6 0.4
CA A:SER236 4.0 6.7 1.0
O A:ASN205 4.0 9.9 1.0
CA A:SER207 4.0 9.1 0.6
CA A:HIS237 4.0 5.8 1.0
CA A:SER207 4.1 9.8 0.4
C A:ASP206 4.1 7.5 1.0
C A:SER236 4.1 6.1 1.0
N A:ILE208 4.2 7.4 1.0
CG1 A:ILE208 4.3 8.9 1.0
OD1 A:ASP206 4.3 6.5 1.0
O A:HOH567 4.4 14.5 0.5
HA A:HIS237 4.5 7.0 1.0
HB3 A:SER236 4.5 10.7 1.0
C A:SER207 4.5 8.7 1.0
HG13 A:ILE208 4.6 10.7 1.0
HD11 A:ILE208 4.7 12.2 1.0
C A:ASN205 4.8 7.9 1.0
N A:ASP206 4.8 6.9 1.0
OG A:SER236 4.8 11.6 1.0
HB2 A:SER207 4.9 14.6 0.4
CG A:ASP206 4.9 6.0 1.0
CG A:HIS237 4.9 6.1 1.0
HD13 A:ILE208 4.9 12.2 1.0
HA A:SER207 4.9 11.0 0.6
CD1 A:ILE208 4.9 10.2 1.0
HA A:SER207 4.9 11.8 0.4
HB A:ILE208 4.9 9.4 1.0

Reference:

H.P.Austin, M.D.Allen, B.S.Donohoe, N.A.Rorrer, F.L.Kearns, R.L.Silveira, B.C.Pollard, G.Dominick, R.Duman, K.El Omari, V.Mykhaylyk, A.Wagner, W.E.Michener, A.Amore, M.S.Skaf, M.F.Crowley, A.W.Thorne, C.W.Johnson, H.L.Woodcock, J.E.Mcgeehan, G.T.Beckham. Characterization and Engineering of A Plastic-Degrading Aromatic Polyesterase. Proc. Natl. Acad. Sci. V. 115 E4350 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29666242
DOI: 10.1073/PNAS.1718804115
Page generated: Sat Jul 12 13:32:12 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy