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Chlorine in PDB 6eun: Crystal Structure of Neisseria Meningitidis Vaccine Antigen Nada Variant 3

Protein crystallography data

The structure of Crystal Structure of Neisseria Meningitidis Vaccine Antigen Nada Variant 3, PDB code: 6eun was solved by L.Dello Iacono, A.Liguori, E.Malito, M.J.Bottomley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.84 / 2.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 69.761, 39.778, 255.494, 90.00, 95.25, 90.00
R / Rfree (%) 19.9 / 22.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Neisseria Meningitidis Vaccine Antigen Nada Variant 3 (pdb code 6eun). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Neisseria Meningitidis Vaccine Antigen Nada Variant 3, PDB code: 6eun:

Chlorine binding site 1 out of 1 in 6eun

Go back to Chlorine Binding Sites List in 6eun
Chlorine binding site 1 out of 1 in the Crystal Structure of Neisseria Meningitidis Vaccine Antigen Nada Variant 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Neisseria Meningitidis Vaccine Antigen Nada Variant 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:69.7
occ:1.00
ND2 A:ASN44 3.0 68.2 1.0
ND2 B:ASN44 3.1 70.5 1.0
ND2 C:ASN44 3.1 69.5 1.0
CA A:ALA41 3.6 68.7 1.0
CA B:ALA41 3.6 65.6 1.0
CA C:ALA41 3.7 68.5 1.0
CB A:ASN44 3.8 65.6 1.0
CB C:ASN44 3.8 65.0 1.0
CB B:ASN44 3.8 62.3 1.0
CG A:ASN44 3.9 80.0 1.0
CB A:ALA41 3.9 70.6 1.0
CG C:ASN44 4.0 80.2 1.0
CG B:ASN44 4.0 80.2 1.0
CB B:ALA41 4.0 67.3 1.0
CB C:ALA41 4.0 70.2 1.0
O A:ALA41 4.4 70.8 1.0
N A:ALA41 4.4 68.8 1.0
O C:ALA41 4.4 71.7 1.0
O B:ALA41 4.4 66.8 1.0
N B:ALA41 4.5 66.3 1.0
N C:ALA41 4.5 68.8 1.0
C A:ALA41 4.5 72.7 1.0
C B:ALA41 4.6 69.7 1.0
C C:ALA41 4.6 72.7 1.0
O A:ALA40 4.6 72.8 1.0
O B:ALA40 4.7 69.2 1.0
O C:ALA40 4.7 71.0 1.0
C A:ALA40 4.8 72.1 1.0
C B:ALA40 4.9 69.8 1.0
C C:ALA40 4.9 71.8 1.0

Reference:

A.Liguori, L.Dello Iacono, G.Maruggi, B.Benucci, M.Merola, P.Lo Surdo, J.Lopez-Sagaseta, M.Pizza, E.Malito, M.J.Bottomley. NADA3 Structures Reveal Undecad Coiled Coils and LOX1 Binding Regions Competed By Meningococcus B Vaccine-Elicited Human Antibodies. Mbio V. 9 2018.
ISSN: ESSN 2150-7511
PubMed: 30327444
DOI: 10.1128/MBIO.01914-18
Page generated: Sat Jul 27 22:41:11 2024

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