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Chlorine in PDB 6fn0: The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna

Protein crystallography data

The structure of The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna, PDB code: 6fn0 was solved by S.Franz, E.Ignatz, S.Wenzel, H.Zielosko, J.Yamamoto, M.Mittag, L.-O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.20 / 2.90
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 146.240, 146.240, 67.440, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 21.2

Other elements in 6fn0:

The structure of The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna (pdb code 6fn0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna, PDB code: 6fn0:

Chlorine binding site 1 out of 1 in 6fn0

Go back to Chlorine Binding Sites List in 6fn0
Chlorine binding site 1 out of 1 in the The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Animal-Like Cryptochrome From Chlamydomonas Reinhardtii in Complex with 6-4 Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl101

b:68.5
occ:1.00
N7 D:DG4 3.3 75.7 1.0
O6 D:DG4 3.6 69.3 1.0
O6 D:DG5 4.0 58.6 1.0
C5 D:DC3 4.0 76.6 1.0
C5 D:DG4 4.1 74.8 1.0
C6 D:DG4 4.2 71.0 1.0
C6 D:DC3 4.3 78.3 1.0
C8 D:DG4 4.3 79.6 1.0
N4 C:DC10 4.7 58.9 1.0
C4 D:DC3 4.7 74.6 1.0

Reference:

S.Franz, E.Ignatz, S.Wenzel, H.Zielosko, E.P.G.N.Putu, M.Maestre-Reyna, M.D.Tsai, J.Yamamoto, M.Mittag, L.O.Essen. Structure of the Bifunctional Cryptochrome Acry From Chlamydomonas Reinhardtii. Nucleic Acids Res. V. 46 8010 2018.
ISSN: ESSN 1362-4962
PubMed: 30032195
DOI: 10.1093/NAR/GKY621
Page generated: Sat Jul 27 23:21:57 2024

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