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Chlorine in PDB 6h9d: Muramidase Domain of Spmx From Asticaccaulis Excentricus

Enzymatic activity of Muramidase Domain of Spmx From Asticaccaulis Excentricus

All present enzymatic activity of Muramidase Domain of Spmx From Asticaccaulis Excentricus:
3.2.1.17;

Protein crystallography data

The structure of Muramidase Domain of Spmx From Asticaccaulis Excentricus, PDB code: 6h9d was solved by A.M.Randich, C.M.Morlot, Y.V.Brun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.56 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 100.440, 100.440, 96.620, 90.00, 90.00, 120.00
R / Rfree (%) 21.1 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Muramidase Domain of Spmx From Asticaccaulis Excentricus (pdb code 6h9d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Muramidase Domain of Spmx From Asticaccaulis Excentricus, PDB code: 6h9d:

Chlorine binding site 1 out of 1 in 6h9d

Go back to Chlorine Binding Sites List in 6h9d
Chlorine binding site 1 out of 1 in the Muramidase Domain of Spmx From Asticaccaulis Excentricus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Muramidase Domain of Spmx From Asticaccaulis Excentricus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:31.8
occ:0.50
NZ A:LYS144 3.2 32.7 1.0
O A:HOH324 3.2 28.8 1.0
CA A:ALA141 3.6 26.5 1.0
CE A:LYS144 3.7 31.7 1.0
CB A:ALA141 3.8 27.4 1.0
CD A:LYS144 3.8 28.9 1.0
N A:ALA141 4.2 28.5 1.0
O A:HOH322 4.6 36.4 1.0
OD1 A:ASP119 4.7 35.9 1.0
C A:ARG140 4.7 24.9 1.0
O A:ARG140 4.8 27.8 1.0
C A:ALA141 4.8 27.3 1.0
CB A:LYS144 4.9 27.9 1.0
CG A:LYS144 4.9 31.9 1.0
O A:ALA141 4.9 28.2 1.0

Reference:

A.M.Randich, D.T.Kysela, C.Morlot, Y.V.Brun. Origin of A Core Bacterial Gene Via Co-Option and Detoxification of A Phage Lysin. Curr.Biol. V. 29 1634 2019.
ISSN: ISSN 0960-9822
PubMed: 31080080
DOI: 10.1016/J.CUB.2019.04.032
Page generated: Sat Jul 12 15:03:20 2025

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