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Chlorine in PDB 6hf2: The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus

Protein crystallography data

The structure of The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus, PDB code: 6hf2 was solved by V.Bagenholm, D.T.Logan, H.Stalbrand, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.79 / 1.69
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 66.812, 68.376, 79.136, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 20.6

Other elements in 6hf2:

The structure of The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus (pdb code 6hf2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus, PDB code: 6hf2:

Chlorine binding site 1 out of 1 in 6hf2

Go back to Chlorine Binding Sites List in 6hf2
Chlorine binding site 1 out of 1 in the The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of BOMAN26B, A GH26 Beta-Mannanase From Bacteroides Ovatus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:24.9
occ:1.00
N A:TYR94 3.2 21.2 1.0
O A:HOH691 3.3 28.4 1.0
N A:SER354 3.4 22.2 1.0
CD A:LYS93 3.4 39.6 1.0
O A:HOH593 3.4 38.3 1.0
OG A:SER354 3.4 34.3 1.0
CB A:SER354 3.5 26.4 1.0
CA A:LYS93 3.8 20.0 1.0
SG A:CYS352 3.9 30.9 1.0
N A:ARG353 4.0 17.7 1.0
O A:TYR94 4.0 20.1 1.0
C A:LYS93 4.0 21.1 1.0
CA A:SER354 4.1 24.9 1.0
CB A:TYR94 4.1 19.7 1.0
CA A:TYR94 4.1 16.6 1.0
CB A:LYS93 4.1 24.8 1.0
CD2 A:TYR94 4.1 21.2 1.0
CB A:ARG353 4.2 16.7 1.0
CB A:CYS352 4.2 24.1 1.0
CG A:LYS93 4.3 30.2 1.0
C A:ARG353 4.3 23.2 1.0
CE A:LYS93 4.3 49.8 1.0
CA A:ARG353 4.4 20.9 1.0
C A:TYR94 4.5 17.7 1.0
CG A:TYR94 4.6 22.4 1.0
C A:CYS352 4.7 22.0 1.0
O A:HOH812 4.9 38.4 1.0
O A:GLY92 4.9 23.1 1.0

Reference:

V.Bagenholm, M.Wiemann, S.K.Reddy, A.Bhattacharya, A.Rosengren, D.T.Logan, H.Stalbrand. A Surface-Exposed GH26 Beta-Mannanase Frombacteroides Ovatus: Structure, Role, and Phylogenetic Analysis OFBOMAN26B. J.Biol.Chem. V. 294 9100 2019.
ISSN: ESSN 1083-351X
PubMed: 31000630
DOI: 10.1074/JBC.RA118.007171
Page generated: Sun Jul 28 00:48:11 2024

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