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Chlorine in PDB 6iil: USP14 Catalytic Domain Bind to IU1-47

Enzymatic activity of USP14 Catalytic Domain Bind to IU1-47

All present enzymatic activity of USP14 Catalytic Domain Bind to IU1-47:
3.4.19.12;

Protein crystallography data

The structure of USP14 Catalytic Domain Bind to IU1-47, PDB code: 6iil was solved by Z.Q.Mei, Y.W.Wang, F.Wang, J.W.Wang, W.He, S.Ding, J.W.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.427, 81.404, 108.161, 90.00, 94.62, 90.00
R / Rfree (%) 18.8 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the USP14 Catalytic Domain Bind to IU1-47 (pdb code 6iil). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the USP14 Catalytic Domain Bind to IU1-47, PDB code: 6iil:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6iil

Go back to Chlorine Binding Sites List in 6iil
Chlorine binding site 1 out of 2 in the USP14 Catalytic Domain Bind to IU1-47


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of USP14 Catalytic Domain Bind to IU1-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:32.5
occ:1.00
CL1 A:A8F501 0.0 32.5 1.0
C2 A:A8F501 1.8 31.2 1.0
C3 A:A8F501 2.7 43.1 1.0
C1 A:A8F501 2.7 21.3 1.0
CE A:LYS342 3.4 37.5 1.0
CB A:HIS426 3.8 12.8 1.0
ND1 A:HIS426 3.9 17.9 1.0
CG A:HIS426 4.0 14.2 1.0
C4 A:A8F501 4.0 42.9 1.0
C6 A:A8F501 4.0 23.2 1.0
CD1 A:TYR476 4.0 27.8 1.0
CD A:LYS342 4.1 36.0 1.0
CG A:LYS342 4.1 37.9 1.0
CD A:ARG330 4.2 38.3 1.0
NZ A:LYS342 4.2 31.9 1.0
CB A:ARG330 4.2 47.2 1.0
CE1 A:TYR476 4.5 32.2 1.0
CG A:TYR476 4.5 18.0 1.0
C5 A:A8F501 4.6 33.2 1.0
CE1 A:HIS426 4.7 19.5 1.0
CB A:TYR476 4.8 10.8 1.0
CG A:ARG330 4.8 47.0 1.0
CD2 A:HIS426 4.9 17.9 1.0

Chlorine binding site 2 out of 2 in 6iil

Go back to Chlorine Binding Sites List in 6iil
Chlorine binding site 2 out of 2 in the USP14 Catalytic Domain Bind to IU1-47


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of USP14 Catalytic Domain Bind to IU1-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:68.9
occ:1.00
CL1 B:A8F501 0.0 68.9 1.0
C2 B:A8F501 1.8 67.9 1.0
C1 B:A8F501 2.8 67.0 1.0
C3 B:A8F501 2.8 69.3 1.0
ND1 B:HIS426 3.8 49.2 1.0
CD1 B:TYR476 3.8 46.0 1.0
CE B:LYS342 3.9 72.2 1.0
CB B:HIS426 3.9 38.2 1.0
CD B:LYS342 4.0 74.3 1.0
C6 B:A8F501 4.1 68.9 1.0
C4 B:A8F501 4.1 71.0 1.0
CG B:HIS426 4.1 49.1 1.0
CG B:LYS342 4.1 77.2 1.0
CG B:TYR476 4.2 36.1 1.0
CE1 B:TYR476 4.3 41.4 1.0
CG B:ARG330 4.3 68.7 1.0
CD B:ARG330 4.4 63.2 1.0
CB B:TYR476 4.5 35.0 1.0
C5 B:A8F501 4.6 70.4 1.0
CE1 B:HIS426 4.7 50.3 1.0
O B:ARG330 4.7 87.4 1.0
NZ B:LYS342 4.8 74.8 1.0
CD2 B:TYR476 4.9 36.3 1.0
CZ B:TYR476 5.0 44.0 1.0

Reference:

Y.Wang, Y.Jiang, S.Ding, J.Li, N.Song, Y.Ren, D.Hong, C.Wu, B.Li, F.Wang, W.He, J.Wang, Z.Mei. Small Molecule Inhibitors Reveal Allosteric Regulation of USP14 Via Steric Blockade. Cell Res. V. 28 1186 2018.
ISSN: ISSN 1748-7838
PubMed: 30254335
DOI: 10.1038/S41422-018-0091-X
Page generated: Sat Jul 12 15:45:25 2025

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