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Chlorine in PDB 6j6p: Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D

Protein crystallography data

The structure of Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D, PDB code: 6j6p was solved by T.Xu, L.Lin, Z.Yuchi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.48 / 1.53
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 55.828, 55.828, 131.552, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 22.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D (pdb code 6j6p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D, PDB code: 6j6p:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6j6p

Go back to Chlorine Binding Sites List in 6j6p
Chlorine binding site 1 out of 2 in the Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl3102

b:61.6
occ:1.00
N A:ASN2853 3.4 27.2 1.0
CB A:ASN2853 3.8 38.6 1.0
CB A:ASN2852 3.9 24.1 1.0
CA A:ASN2853 4.2 27.4 1.0
CA A:ASN2852 4.3 28.1 1.0
C A:ASN2852 4.4 30.9 1.0
CG A:ASN2852 4.8 33.9 1.0

Chlorine binding site 2 out of 2 in 6j6p

Go back to Chlorine Binding Sites List in 6j6p
Chlorine binding site 2 out of 2 in the Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Diamondback Moth Ryanodine Receptor Phosphorylation Domain(2836-3050) Mutant S2946D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl3103

b:45.2
occ:1.00
NZ A:LYS2910 3.4 30.4 1.0
NE2 A:GLN2860 3.5 43.0 1.0
CG A:GLN2860 3.8 35.6 1.0
NZ A:LYS2906 4.0 24.9 1.0
O A:HOH3317 4.0 46.5 1.0
CD A:GLN2860 4.1 55.0 1.0
CE A:LYS2910 4.1 28.4 1.0
CE2 A:TYR2898 4.1 22.2 1.0
OH A:TYR2898 4.2 23.5 1.0
CD A:LYS2906 4.3 17.9 1.0
CZ A:TYR2898 4.7 18.8 1.0
CE A:LYS2906 4.7 19.5 1.0

Reference:

T.Xu, Z.Yuchi. Crystal Structure of Diamondback Moth Ryanodine Receptor REPEAT34 Domain Reveals Insect-Specific Phosphorylation Sites. Bmc Biol. V. 17 77 2019.
ISSN: ESSN 1741-7007
PubMed: 31597572
DOI: 10.1186/S12915-019-0698-5
Page generated: Sat Jul 12 16:00:15 2025

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