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Chlorine in PDB 6kyy: Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli

Protein crystallography data

The structure of Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli, PDB code: 6kyy was solved by Y.Baek, N.-C.Ha, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.24 / 2.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.694, 188.955, 95.056, 90.00, 107.62, 90.00
R / Rfree (%) 22.3 / 27.1

Other elements in 6kyy:

The structure of Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli also contains other interesting chemical elements:

Copper (Cu) 32 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli (pdb code 6kyy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli, PDB code: 6kyy:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6kyy

Go back to Chlorine Binding Sites List in 6kyy
Chlorine binding site 1 out of 2 in the Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl510

b:12.1
occ:1.00
N B:ASN327 3.4 11.9 1.0
OE1 C:GLU117 3.8 45.2 1.0
CA B:ASN327 3.8 14.5 1.0
NE C:ARG108 3.9 39.6 1.0
N B:VAL328 3.9 25.1 1.0
OD1 C:ASN115 4.2 40.8 1.0
CB C:ASN115 4.2 13.7 1.0
C B:LYS326 4.3 14.7 1.0
CD C:ARG108 4.3 24.4 1.0
C B:ASN327 4.4 22.2 1.0
OE2 C:GLU117 4.4 48.2 1.0
CD C:GLU117 4.5 33.3 1.0
CA B:LYS326 4.5 14.5 1.0
CG C:ASN115 4.6 36.8 1.0
OD1 B:ASN327 4.8 22.8 1.0
CG C:ARG108 4.9 14.8 1.0
CG2 B:VAL328 4.9 6.2 1.0
CZ C:ARG108 4.9 19.6 1.0
CB B:VAL328 4.9 6.3 1.0
CA B:VAL328 5.0 15.0 1.0

Chlorine binding site 2 out of 2 in 6kyy

Go back to Chlorine Binding Sites List in 6kyy
Chlorine binding site 2 out of 2 in the Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cu(II) Complex of Hocl-Induced Flavoprotein Disulfide Reductase Rcla From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl510

b:36.4
occ:1.00
N C:TYR168 3.5 28.9 1.0
CG1 C:ILE169 3.7 8.6 1.0
N C:ILE169 3.8 37.8 1.0
CA C:GLY167 4.1 17.3 1.0
C C:GLY167 4.2 24.0 1.0
CA C:TYR168 4.4 22.5 1.0
CB C:ILE169 4.4 13.9 1.0
CD1 C:ILE169 4.4 8.2 1.0
CB C:TYR168 4.5 23.1 1.0
CA C:GLY251 4.5 15.4 1.0
C C:TYR168 4.6 25.9 1.0
N C:GLY251 4.7 16.5 1.0
CA C:ILE169 4.7 19.6 1.0
CD1 C:TYR168 4.9 35.2 1.0

Reference:

Y.Baek, J.Kim, J.Ahn, I.Jo, S.Hong, S.Ryu, N.-C.Ha. Structure and Function of the Hypochlorous Acid-Induced Flavoprotein Rcla From Escherichia Coli J.Biol.Chem. 2020.
ISSN: ESSN 1083-351X
Page generated: Sun Jul 28 02:39:39 2024

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