Atomistry » Chlorine » PDB 6lw2-6m7z » 6lxx
Atomistry »
  Chlorine »
    PDB 6lw2-6m7z »
      6lxx »

Chlorine in PDB 6lxx: Frog EPDR1 with An Ir Atom

Protein crystallography data

The structure of Frog EPDR1 with An Ir Atom, PDB code: 6lxx was solved by S.Park, J.Park, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.26 / 2.40
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 62.008, 62.008, 233.409, 90, 90, 120
R / Rfree (%) 23.3 / 29.3

Other elements in 6lxx:

The structure of Frog EPDR1 with An Ir Atom also contains other interesting chemical elements:

Iridium (Ir) 1 atom
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Frog EPDR1 with An Ir Atom (pdb code 6lxx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Frog EPDR1 with An Ir Atom, PDB code: 6lxx:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6lxx

Go back to Chlorine Binding Sites List in 6lxx
Chlorine binding site 1 out of 2 in the Frog EPDR1 with An Ir Atom


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Frog EPDR1 with An Ir Atom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:85.7
occ:1.00
CL A:CL304 2.4 74.1 1.0
IR A:IR302 2.8 179.1 0.5
NZ A:LYS81 4.2 58.2 1.0
OG A:SER82 4.8 78.6 1.0
CE A:LYS81 4.8 54.9 1.0

Chlorine binding site 2 out of 2 in 6lxx

Go back to Chlorine Binding Sites List in 6lxx
Chlorine binding site 2 out of 2 in the Frog EPDR1 with An Ir Atom


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Frog EPDR1 with An Ir Atom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:74.1
occ:1.00
CL A:CL303 2.4 85.7 1.0
IR A:IR302 2.7 179.1 0.5
OG A:SER82 3.0 78.6 1.0
N A:SER82 3.3 63.4 1.0
CA A:LYS81 3.8 57.1 1.0
CE A:LYS81 3.8 54.9 1.0
CB A:SER82 4.0 71.7 1.0
CB A:LYS81 4.0 59.7 1.0
C A:LYS81 4.0 54.3 1.0
NZ A:LYS81 4.1 58.2 1.0
CD A:LYS81 4.1 58.9 1.0
CA A:SER82 4.3 62.2 1.0
CG A:LYS81 4.7 58.4 1.0

Reference:

S.Park, J.K.Park. Soaked Iridium Atoms Observed in the Frog Ependymin-Related Protein 1 To Be Published.
Page generated: Sun Jul 28 02:57:55 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy