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Chlorine in PDB 6m47: X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form

Protein crystallography data

The structure of X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form, PDB code: 6m47 was solved by P.Shabareesh, A.K.Mallela, D.Joseph, A.Penmatsa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.50 / 3.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 97.004, 140.956, 167.795, 90, 90, 90
R / Rfree (%) 24.1 / 27.5

Other elements in 6m47:

The structure of X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form (pdb code 6m47). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form, PDB code: 6m47:

Chlorine binding site 1 out of 1 in 6m47

Go back to Chlorine Binding Sites List in 6m47
Chlorine binding site 1 out of 1 in the X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of A Drosophila Dopamine Transporter with Net-Like Mutations (D121G/S426M/F471L) in Tramadol Bound Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:80.3
occ:1.00
OG A:SER320 2.7 84.1 1.0
OH A:TYR69 3.0 84.5 1.0
OG A:SER356 3.1 77.7 1.0
CB A:SER320 3.4 87.7 1.0
NE2 A:GLN316 3.7 81.3 1.0
CB A:SER356 3.7 74.9 1.0
NA A:NA603 4.1 85.7 1.0
CZ A:TYR69 4.1 78.5 1.0
ND2 A:ASN352 4.1 83.8 1.0
CB A:PHE53 4.1 82.4 1.0
CG A:GLN316 4.3 85.6 1.0
CE1 A:TYR69 4.4 74.2 1.0
CD A:GLN316 4.5 83.7 1.0
CG A:PHE53 4.5 86.3 1.0
CD1 A:PHE53 4.5 78.3 1.0
OD1 A:ASN49 4.6 77.8 1.0
CG A:ASN49 4.8 80.2 1.0
CA A:SER320 4.8 84.9 1.0
CA A:ASN49 4.8 77.1 1.0
O A:GLN316 5.0 81.0 1.0
CA A:SER353 5.0 82.9 1.0
OG A:SER353 5.0 77.7 1.0

Reference:

P.Shabareesh, A.K.Mallela, D.Joseph. Structural Basis of Norepinephrine Recognition and Transport Inhibition in Neurotransmitter Transporters To Be Published.
Page generated: Sat Jul 12 16:40:30 2025

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