Atomistry » Chlorine » PDB 6m8q-6mjh » 6mf5
Atomistry »
  Chlorine »
    PDB 6m8q-6mjh »
      6mf5 »

Chlorine in PDB 6mf5: Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide.

Enzymatic activity of Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide.

All present enzymatic activity of Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide.:
2.7.11.21;

Protein crystallography data

The structure of Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide., PDB code: 6mf5 was solved by A.Guarne, A.W.Almawi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.08 / 2.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.470, 68.190, 86.230, 90.00, 102.59, 90.00
R / Rfree (%) 23.1 / 26.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide. (pdb code 6mf5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide., PDB code: 6mf5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6mf5

Go back to Chlorine Binding Sites List in 6mf5
Chlorine binding site 1 out of 2 in the Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl801

b:27.5
occ:1.00
HG A:SER464 2.4 41.2 1.0
HG A:SER521 2.7 49.0 1.0
HH A:TYR618 2.8 39.1 1.0
HB3 A:SER521 2.9 40.4 1.0
OG A:SER464 2.9 43.9 1.0
HB2 A:SER521 3.1 40.4 1.0
CB A:SER521 3.3 42.1 1.0
OG A:SER521 3.4 49.4 1.0
OH A:TYR618 3.4 42.6 1.0
H A:THR465 3.4 36.5 1.0
O A:THR465 3.7 47.7 1.0
HA A:SER464 3.9 41.1 1.0
N A:THR465 4.0 39.6 1.0
CB A:SER464 4.1 40.8 1.0
C A:THR465 4.2 41.8 1.0
CA A:SER464 4.4 44.8 1.0
HE1 A:TYR618 4.5 32.5 1.0
CZ A:TYR618 4.5 37.3 1.0
C A:SER464 4.6 41.7 1.0
HA A:ASN466 4.6 39.5 1.0
HB2 A:SER464 4.6 37.9 1.0
CA A:THR465 4.7 43.8 1.0
OD1 A:ASP519 4.7 37.6 1.0
HB3 A:SER464 4.7 37.9 1.0
CA A:SER521 4.8 43.6 1.0
N A:ASN466 4.9 36.5 1.0
CE1 A:TYR618 4.9 35.2 1.0
HA A:THR465 5.0 40.5 1.0

Chlorine binding site 2 out of 2 in 6mf5

Go back to Chlorine Binding Sites List in 6mf5
Chlorine binding site 2 out of 2 in the Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Budding Yeast CDC5 Polo-Box Domain in Complex with SPC72 Phosphopeptide. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl801

b:27.5
occ:1.00
HG B:SER521 2.4 82.7 1.0
HB2 B:SER521 2.6 65.4 1.0
OG B:SER521 2.9 85.8 1.0
O B:THR465 3.0 80.3 1.0
CB B:SER521 3.1 67.8 1.0
HB3 B:SER521 3.4 65.4 1.0
H B:THR465 3.8 68.9 1.0
OH B:TYR618 4.0 78.1 1.0
HA B:ASN466 4.1 62.7 1.0
C B:THR465 4.2 63.4 1.0
HH B:TYR618 4.2 71.7 1.0
OG B:SER464 4.3 73.4 1.0
HG B:SER464 4.5 70.2 1.0
CA B:SER521 4.5 71.7 1.0
N B:THR465 4.6 76.1 1.0
C B:SER521 4.8 77.6 1.0
HA B:SER521 4.9 70.6 1.0
HE1 B:TYR618 4.9 57.6 1.0
CA B:ASN466 5.0 68.7 1.0
N B:ASN466 5.0 69.0 1.0

Reference:

A.Guarne, A.W.Almawi. Crystal Structure of the Bacillus Subtilis Sliding Clamp-Mutl Complex. To Be Published.
Page generated: Sat Jul 12 16:47:57 2025

Last articles

Zn in 5A3C
Zn in 5A3A
Zn in 5A31
Zn in 5A3B
Zn in 5A2S
Zn in 5A39
Zn in 5A2Q
Zn in 5A25
Zn in 5A2R
Zn in 5A23
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy