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Chlorine in PDB 6mn3: Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme

Enzymatic activity of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme

All present enzymatic activity of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme:
2.3.1.81;

Protein crystallography data

The structure of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme, PDB code: 6mn3 was solved by P.J.Stogios, E.Evdokimova, Z.Wawrzak, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.77 / 2.40
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.170, 55.327, 94.342, 90.00, 102.63, 90.00
R / Rfree (%) 17.6 / 22.2

Other elements in 6mn3:

The structure of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme (pdb code 6mn3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme, PDB code: 6mn3:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 6mn3

Go back to Chlorine Binding Sites List in 6mn3
Chlorine binding site 1 out of 4 in the Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:67.6
occ:1.00
 N A:PHE31 3.3 45.1 1.0
N A:VAL84 3.5 49.7 1.0
CB A:PHE31 3.6 43.1 1.0
CG2 A:VAL84 3.6 51.2 1.0
CA A:GLY83 3.7 45.8 1.0
N A:ARG32 3.7 36.5 1.0
CA A:PHE31 3.8 41.6 1.0
CG A:ARG32 4.0 60.7 1.0
C A:GLY83 4.1 52.5 1.0
C A:SER30 4.2 41.5 1.0
C A:PHE31 4.2 37.0 1.0
CB A:VAL84 4.3 46.2 1.0
CA A:SER30 4.4 37.6 1.0
CA A:VAL84 4.5 46.8 1.0
CB A:ARG32 4.7 52.5 1.0
O A:HOH448 4.7 40.0 1.0
CA A:ARG32 4.8 44.5 1.0
OG A:SER30 4.8 44.8 1.0
CG A:PHE31 4.8 41.4 1.0
NE A:ARG32 4.8 82.7 1.0
CD A:ARG32 4.8 71.8 1.0
N A:GLY83 4.9 50.6 1.0

Chlorine binding site 2 out of 4 in 6mn3

Go back to Chlorine Binding Sites List in 6mn3
Chlorine binding site 2 out of 4 in the Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:33.2
occ:1.00
 O B:HOH462 3.2 44.0 1.0
O B:HOH474 3.3 34.0 1.0
NH1 B:ARG217 3.4 36.6 1.0
N B:HIS147 3.4 29.9 1.0
CB B:ALA194 3.7 24.9 1.0
CA B:ALA194 3.8 25.0 1.0
CA B:GLY146 3.8 23.6 1.0
CD2 B:HIS147 3.8 20.5 1.0
CZ B:ARG217 4.0 42.0 1.0
NH2 B:ARG217 4.0 52.5 1.0
C B:GLY146 4.1 26.7 1.0
CB B:ASP197 4.1 23.2 1.0
CB B:HIS147 4.2 20.9 1.0
CG B:HIS147 4.4 19.4 1.0
CA B:HIS147 4.4 26.1 1.0
CG B:ASP197 4.4 24.5 1.0
O B:ALA194 4.4 26.0 1.0
C B:ALA194 4.7 33.0 1.0
OD1 B:ASP197 4.7 25.1 1.0
N B:ALA194 4.8 22.9 1.0
OD2 B:ASP197 4.9 28.6 1.0

Chlorine binding site 3 out of 4 in 6mn3

Go back to Chlorine Binding Sites List in 6mn3
Chlorine binding site 3 out of 4 in the Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:78.7
occ:1.00
 O B:HOH455 3.5 53.6 1.0
O A:HOH410 3.6 58.8 1.0
ND1 B:HIS169 3.8 47.8 1.0
CE1 B:HIS169 4.0 49.1 1.0
NH2 B:ARG180 4.2 57.7 1.0
O B:HOH452 4.4 49.2 1.0
O B:PRO167 4.5 55.9 1.0

Chlorine binding site 4 out of 4 in 6mn3

Go back to Chlorine Binding Sites List in 6mn3
Chlorine binding site 4 out of 4 in the Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Aminoglycoside Acetyltransferase Aac(3)-Iva, Apoenzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:67.0
occ:1.00
 NE2 B:GLN2 3.3 42.8 1.0
CD B:GLN2 3.4 43.9 1.0
OE1 B:GLN2 3.5 43.8 1.0
CG B:GLN2 4.3 42.2 1.0
CA B:GLY0 5.0 79.0 1.0

Reference:

P.J.Stogios, P.J.Stogios, E.Evdokimova, Z.Wawrzak, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.
Page generated: Sat Jul 12 16:52:37 2025

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