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Chlorine in PDB 6ome: Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx

Enzymatic activity of Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx

All present enzymatic activity of Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx:
3.4.11.1; 3.4.11.10;

Protein crystallography data

The structure of Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx, PDB code: 6ome was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.16 / 1.95
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 137.960, 137.960, 128.140, 90.00, 90.00, 120.00
R / Rfree (%) 14.3 / 17.1

Other elements in 6ome:

The structure of Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx (pdb code 6ome). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx, PDB code: 6ome:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6ome

Go back to Chlorine Binding Sites List in 6ome
Chlorine binding site 1 out of 2 in the Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl512

b:49.6
occ:1.00
 O A:HOH613 2.2 45.9 1.0
N A:LEU514 2.5 54.2 1.0
NA A:NA510 2.8 36.8 1.0
O A:HOH718 2.8 30.2 1.0
C A:LEU514 3.1 55.0 1.0
CA A:LEU514 3.2 47.8 1.0
O A:LEU514 3.4 40.4 1.0
OXT A:LEU514 3.4 40.3 1.0
O A:HOH840 3.5 32.6 1.0
OD1 A:ASP273 3.8 23.0 1.0
O A:HOH940 4.5 59.2 1.0
O A:HOH927 4.6 53.0 1.0
CB A:LEU514 4.6 55.9 1.0
O A:LEU274 4.9 17.7 1.0
CG A:ASP273 5.0 29.1 1.0

Chlorine binding site 2 out of 2 in 6ome

Go back to Chlorine Binding Sites List in 6ome
Chlorine binding site 2 out of 2 in the Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl513

b:72.8
occ:1.00
 O A:HOH670 3.4 39.8 1.0
NE A:ARG367 3.6 29.6 1.0
NH2 A:ARG367 4.0 35.0 1.0
CZ A:ARG367 4.3 38.0 1.0
CB A:LEU396 4.3 31.4 1.0
CB A:ALA458 4.4 28.4 1.0
OD1 A:ASN393 4.5 35.4 1.0
CD A:ARG367 4.5 29.9 1.0
OH A:TYR492 4.5 32.4 1.0
CA A:LEU396 4.6 32.0 1.0
N A:LEU396 4.6 28.3 1.0
CD1 A:LEU396 4.7 30.3 1.0
CG1 A:VAL395 4.8 37.0 1.0
CG A:ASN393 4.9 32.2 1.0
CB A:ARG367 5.0 28.2 1.0

Reference:

T.E.Edwards, D.M.Dranow, D.D.Lorimer, P.S.Horanyi, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx To Be Published.
Page generated: Sat Jul 12 17:53:59 2025

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