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Chlorine in PDB 6qz8: Structure of Mcl-1 in Complex with Compound 10D

Protein crystallography data

The structure of Structure of Mcl-1 in Complex with Compound 10D, PDB code: 6qz8 was solved by P.Dokurno, Z.Szlavik, L.Ondi, M.Csekei, A.Paczal, Z.B.Szabo, G.Radics, J.Murray, J.Davidson, I.Chen, B.Davis, R.E.Hubbard, C.Pedder, A.E.Surgenor, J.Smith, A.Robertson, G.Letoumelin-Braizat, N.Cauquil, M.Zarka, D.Demarles, F.Perron-Sierra, O.Geneste, A.Kotschy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.94 / 2.15
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 39.470, 39.470, 326.644, 90.00, 90.00, 120.00
R / Rfree (%) 20.4 / 28.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Mcl-1 in Complex with Compound 10D (pdb code 6qz8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Mcl-1 in Complex with Compound 10D, PDB code: 6qz8:

Chlorine binding site 1 out of 1 in 6qz8

Go back to Chlorine Binding Sites List in 6qz8
Chlorine binding site 1 out of 1 in the Structure of Mcl-1 in Complex with Compound 10D


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Mcl-1 in Complex with Compound 10D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:36.3
occ:1.00
CL A:JL8401 0.0 36.3 1.0
C28 A:JL8401 1.7 31.6 1.0
C26 A:JL8401 2.7 37.2 1.0
C25 A:JL8401 2.7 30.9 1.0
O31 A:JL8401 2.9 35.8 1.0
C30 A:JL8401 3.0 34.7 1.0
O A:ALA227 3.2 29.2 1.0
C A:ALA227 3.5 28.9 1.0
CB A:MET231 3.6 35.7 1.0
CB A:ALA227 3.8 29.3 1.0
C20 A:JL8401 3.9 28.1 1.0
O A:HOH519 3.9 39.8 1.0
N A:PHE228 4.0 29.6 1.0
C27 A:JL8401 4.0 30.6 1.0
C24 A:JL8401 4.0 30.4 1.0
CD1 A:PHE228 4.1 30.6 1.0
CA A:ALA227 4.1 28.3 1.0
CA A:PHE228 4.2 29.4 1.0
CE A:MET231 4.2 43.2 1.0
C23 A:JL8401 4.2 27.2 1.0
CG A:MET231 4.4 36.8 1.0
C29 A:JL8401 4.5 32.9 1.0
CE1 A:PHE228 4.6 27.8 1.0
N A:MET231 4.8 32.4 1.0
CA A:MET231 4.8 35.1 1.0

Reference:

Z.Szlavik, L.Ondi, M.Csekei, A.Paczal, Z.B.Szabo, G.Radics, J.Murray, J.Davidson, I.Chen, B.Davis, R.E.Hubbard, C.Pedder, P.Dokurno, A.Surgenor, J.Smith, A.Robertson, G.Letoumelin-Braizat, N.Cauquil, M.Zarka, D.Demarles, F.Perron-Sierra, A.Claperon, F.Colland, O.Geneste, A.Kotschy. Structure-Guided Discovery of A Selective Mcl-1 Inhibitor with Cellular Activity. J.Med.Chem. V. 62 6913 2019.
ISSN: ISSN 0022-2623
PubMed: 31339316
DOI: 10.1021/ACS.JMEDCHEM.9B00134
Page generated: Mon Jul 29 14:18:02 2024

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