Atomistry » Chlorine » PDB 6rp2-6s06 » 6rr0
Atomistry »
  Chlorine »
    PDB 6rp2-6s06 »
      6rr0 »

Chlorine in PDB 6rr0: Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide

Enzymatic activity of Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide

All present enzymatic activity of Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide:
3.4.19.12;

Protein crystallography data

The structure of Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide, PDB code: 6rr0 was solved by I.Deshpande, J.J.Keusch, K.Challa, V.Iesmantavicius, S.M.Gasser, H.Gut, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.57 / 2.18
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.040, 75.280, 95.910, 90.00, 97.24, 90.00
R / Rfree (%) 19.6 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide (pdb code 6rr0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide, PDB code: 6rr0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6rr0

Go back to Chlorine Binding Sites List in 6rr0
Chlorine binding site 1 out of 2 in the Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:88.0
occ:1.00
CB A:SER1069 3.4 46.8 1.0
N A:MET1071 3.4 46.4 1.0
CD1 A:PHE1070 3.5 47.5 1.0
CG A:MET1071 3.5 62.3 1.0
CE1 A:PHE1070 3.5 49.2 1.0
OE2 A:GLU1039 3.6 86.1 1.0
CB A:MET1071 3.6 55.2 1.0
OG A:SER1069 3.7 56.6 1.0
N A:PHE1070 3.7 43.6 1.0
CA A:GLY1038 4.0 42.4 1.0
C A:GLY1038 4.1 46.3 1.0
SD A:MET1071 4.1 71.7 1.0
CA A:MET1071 4.1 49.4 1.0
CG A:PHE1070 4.1 45.8 1.0
CZ A:PHE1070 4.2 49.7 1.0
C A:SER1069 4.2 45.1 1.0
CA A:SER1069 4.3 40.2 1.0
O A:HOH1215 4.3 70.6 1.0
O A:GLY1038 4.3 45.0 1.0
C A:PHE1070 4.4 47.8 1.0
CA A:PHE1070 4.5 43.1 1.0
N A:GLU1039 4.5 44.6 1.0
CD A:GLU1039 4.5 88.8 1.0
N A:GLY1038 4.6 41.7 1.0
CD2 A:PHE1070 4.7 48.4 1.0
CG A:GLU1039 4.8 63.0 1.0
CE2 A:PHE1070 4.8 52.3 1.0
CB A:PHE1070 4.8 44.0 1.0

Chlorine binding site 2 out of 2 in 6rr0

Go back to Chlorine Binding Sites List in 6rr0
Chlorine binding site 2 out of 2 in the Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the SIR4 H-Brct Domain in Complex with UBP10 PT123 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1102

b:0.6
occ:1.00
O A:HOH1206 3.5 61.5 1.0
NH1 A:ARG1075 3.5 71.0 1.0
CB A:MET1071 3.6 55.2 1.0
N A:LYS1072 3.9 43.5 1.0
OE2 A:GLU1039 3.9 86.1 1.0
C A:MET1071 4.2 50.2 1.0
OG A:SER1069 4.2 56.6 1.0
NH2 A:ARG1075 4.2 71.7 1.0
CZ A:ARG1075 4.4 88.9 1.0
CA A:LYS1072 4.4 42.7 1.0
CA A:MET1071 4.5 49.4 1.0
CB A:LYS1072 4.6 42.2 1.0
O A:MET1071 4.7 51.7 1.0
CG A:MET1071 4.7 62.3 1.0
CE A:MET1071 4.8 70.8 1.0
SD A:MET1071 4.8 71.7 1.0
CD A:GLU1039 4.9 88.8 1.0

Reference:

I.Deshpande, J.J.Keusch, K.Challa, V.Iesmantavicius, S.M.Gasser, H.Gut. The SIR4 H-Brct Domain Interacts with Phospho-Proteins to Sequester and Repress Yeast Heterochromatin. Embo J. V. 38 01744 2019.
ISSN: ESSN 1460-2075
PubMed: 31515872
DOI: 10.15252/EMBJ.2019101744
Page generated: Sat Jul 12 19:29:14 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy