Atomistry » Chlorine » PDB 6rp2-6s06 » 6rvm
Atomistry »
  Chlorine »
    PDB 6rp2-6s06 »
      6rvm »

Chlorine in PDB 6rvm: Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form

Protein crystallography data

The structure of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form, PDB code: 6rvm was solved by C.Fernandez-Tornero, J.M.Andreu, A.J.Canosa-Valls, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.16 / 2.16
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 72.564, 78.805, 225.639, 90.00, 90.00, 90.00
R / Rfree (%) 23 / 25.6

Other elements in 6rvm:

The structure of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form (pdb code 6rvm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 9 binding sites of Chlorine where determined in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form, PDB code: 6rvm:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Chlorine binding site 1 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 1 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:94.8
occ:1.00
OD2 A:ASP159 3.1 68.0 1.0
O A:HOH509 3.2 59.5 1.0
HD12 A:LEU127 3.4 96.1 1.0
HA A:LEU127 3.6 80.2 1.0
OD1 A:ASP159 3.8 72.7 1.0
CG A:ASP159 3.8 73.6 1.0
HG3 A:LYS122 3.9 95.8 1.0
CD1 A:LEU127 4.3 80.1 1.0
O A:ALA126 4.3 70.4 1.0
HD13 A:LEU127 4.4 96.1 1.0
HA2 A:GLY125 4.4 97.7 1.0
CA A:LEU127 4.4 66.9 1.0
N A:LEU127 4.5 74.1 1.0
C A:ALA126 4.5 69.2 1.0
HE2 A:LYS122 4.6 98.8 1.0
HG2 A:LYS122 4.7 95.8 1.0
HA A:LYS122 4.7 87.9 1.0
CG A:LYS122 4.7 79.8 1.0
H A:THR128 4.8 69.6 1.0
HD11 A:LEU127 4.8 96.1 1.0
O3 A:SO4401 4.9 66.6 1.0
H A:LEU127 4.9 88.9 1.0
OD1 A:ASP187 5.0 60.6 1.0
O1 A:SO4401 5.0 88.1 1.0

Chlorine binding site 2 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 2 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:76.8
occ:1.00
HD22 A:ASN299 2.5 74.5 1.0
O A:HOH518 2.7 66.6 1.0
OE2 A:GLU181 2.9 67.4 1.0
HG11 A:VAL297 3.2 59.1 1.0
ND2 A:ASN299 3.2 62.0 1.0
HD21 A:ASN299 3.4 74.5 1.0
HG21 B:ILE293 3.5 63.8 1.0
O A:HOH510 3.6 50.1 1.0
HB2 A:ASN299 3.7 67.9 1.0
HD13 B:ILE293 3.9 71.2 1.0
CD A:GLU181 4.0 66.8 1.0
CG1 A:VAL297 4.0 49.2 1.0
HG12 A:VAL297 4.0 59.1 1.0
HG23 B:ILE293 4.2 63.8 1.0
CG A:ASN299 4.2 57.1 1.0
CG2 B:ILE293 4.2 53.1 1.0
HG21 A:THR265 4.3 58.8 1.0
OE1 A:GLU181 4.4 63.0 1.0
CB A:ASN299 4.4 56.5 1.0
HG13 A:VAL297 4.5 59.1 1.0
HG22 B:ILE293 4.6 63.8 1.0
HZ3 A:LYS184 4.6 96.0 1.0
HZ2 A:LYS184 4.7 96.0 1.0
HG21 A:VAL297 4.7 53.9 1.0
HB3 A:ASN299 4.8 67.9 1.0
CD1 B:ILE293 4.8 59.3 1.0

Chlorine binding site 3 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 3 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl407

b:0.9
occ:1.00
HD22 A:ASN166 2.4 99.5 1.0
HB3 A:ASN166 2.8 89.2 1.0
ND2 A:ASN166 3.2 82.9 1.0
CB A:ASN166 3.6 74.4 1.0
HD21 A:ASN166 3.8 99.5 1.0
HB2 A:ASN166 3.8 89.2 1.0
CG A:ASN166 3.9 67.4 1.0
HE2 A:MET105 4.2 96.3 1.0
HE1 A:MET105 4.4 96.3 1.0
CE A:MET105 4.8 80.3 1.0
HB3 A:ASP167 4.8 92.0 1.0
H A:ASP167 4.8 79.4 1.0
H A:ASN166 4.8 79.0 1.0
CA A:ASN166 4.8 64.1 1.0
N A:ASP167 5.0 66.2 1.0

Chlorine binding site 4 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 4 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl404

b:91.2
occ:1.00
HB2 C:ARG191 2.7 64.3 1.0
O1 C:SO4402 3.2 84.5 1.0
HH11 C:ARG191 3.3 67.4 1.0
HA C:ARG191 3.6 57.3 1.0
CB C:ARG191 3.6 53.6 1.0
OD1 C:ASP187 3.6 54.5 1.0
HD3 C:ARG191 3.7 74.1 1.0
NH1 C:ARG191 3.8 56.2 1.0
O2 C:SO4402 4.0 82.3 1.0
S C:SO4402 4.0 96.5 1.0
HH12 C:ARG191 4.0 67.4 1.0
CA C:ARG191 4.0 47.7 1.0
O3 C:SO4402 4.1 0.5 1.0
HG3 C:ARG191 4.2 73.5 1.0
HB3 C:ARG191 4.2 64.3 1.0
H C:ARG191 4.3 60.1 1.0
CG C:ARG191 4.3 61.2 1.0
CG C:ASP187 4.4 56.2 1.0
N C:ARG191 4.4 50.1 1.0
CD C:ARG191 4.4 61.8 1.0
O C:ASP187 4.4 51.0 1.0
O C:HOH505 4.5 65.7 1.0
OD2 C:ASP187 4.5 60.0 1.0
CZ C:ARG191 4.7 64.6 1.0
NE C:ARG191 4.9 64.7 1.0
OD1 C:ASP159 4.9 62.5 1.0
HB2 C:LEU190 5.0 57.0 1.0

Chlorine binding site 5 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 5 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl405

b:0.3
occ:1.00
OE2 C:GLU185 2.9 62.9 1.0
HD22 C:ASN263 3.2 65.9 1.0
HA3 C:GLY295 3.4 56.3 1.0
O C:HOH501 3.5 58.4 1.0
HG22 D:VAL297 3.6 51.3 1.0
HB2 C:ASN263 3.7 55.3 1.0
ND2 C:ASN263 3.8 54.9 1.0
CD C:GLU185 4.0 57.6 1.0
HD21 C:ASN263 4.1 65.9 1.0
HG21 D:VAL297 4.3 51.3 1.0
CA C:GLY295 4.3 46.9 1.0
OE1 C:GLU185 4.3 62.9 1.0
HG22 C:ILE293 4.4 57.4 1.0
HG13 D:VAL297 4.4 49.0 1.0
CG2 D:VAL297 4.4 42.7 1.0
HG11 D:VAL297 4.4 49.0 1.0
CG C:ASN263 4.4 49.5 1.0
CB C:ASN263 4.5 46.0 1.0
N C:GLY295 4.6 47.6 1.0
H C:GLY295 4.6 57.1 1.0
HG21 C:ILE293 4.7 57.4 1.0
HA2 C:GLY295 4.7 56.3 1.0
CG1 D:VAL297 4.8 40.9 1.0
O C:MET262 4.8 45.8 1.0
HA C:ASN263 4.9 65.3 1.0

Chlorine binding site 6 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 6 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl406

b:0.1
occ:1.00
HD22 C:ASN220 2.1 0.3 1.0
H C:ASN220 2.4 78.4 1.0
ND2 C:ASN220 3.0 97.7 1.0
OG C:SER219 3.2 78.4 1.0
HA C:SER219 3.2 75.3 1.0
N C:ASN220 3.2 65.3 1.0
HB2 C:ASN220 3.3 84.7 1.0
HD21 C:ASN220 3.4 0.3 1.0
HG C:SER219 3.5 94.0 1.0
CA C:SER219 3.8 62.8 1.0
H C:GLN221 3.9 74.3 1.0
CB C:ASN220 3.9 70.6 1.0
CG C:ASN220 3.9 86.1 1.0
CB C:SER219 4.0 62.2 1.0
C C:SER219 4.0 66.0 1.0
CA C:ASN220 4.1 66.7 1.0
HB2 C:SER219 4.2 74.6 1.0
N C:GLN221 4.6 62.0 1.0
HB3 C:SER219 4.8 74.6 1.0
HB3 C:ASN220 4.8 84.7 1.0
C C:ASN220 4.9 61.8 1.0
HA C:ASN220 4.9 80.0 1.0

Chlorine binding site 7 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 7 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl403

b:85.4
occ:1.00
H D:THR109 2.2 75.4 1.0
HG23 D:THR109 2.7 78.9 1.0
HA3 D:GLY108 2.8 80.3 1.0
N D:THR109 3.0 62.9 1.0
HB3 D:ALA73 3.4 0.5 1.0
CA D:GLY108 3.5 67.0 1.0
OG1 D:THR109 3.5 58.9 1.0
HA2 D:GLY108 3.5 80.3 1.0
CG2 D:THR109 3.6 65.7 1.0
MG D:MG406 3.6 72.9 1.0
C D:GLY108 3.7 65.8 1.0
HG1 D:THR109 3.8 70.7 1.0
CB D:THR109 3.9 64.7 1.0
HG22 D:THR109 4.1 78.9 1.0
CA D:THR109 4.1 64.4 1.0
HG21 D:THR109 4.2 78.9 1.0
CB D:ALA73 4.3 87.9 1.0
H D:GLY110 4.4 75.2 1.0
HG1 D:THR45 4.4 75.6 1.0
HB1 D:ALA73 4.5 0.5 1.0
HA D:THR109 4.6 77.2 1.0
O D:GLY107 4.6 67.1 1.0
HB2 D:ALA73 4.7 0.5 1.0
N D:GLY108 4.8 79.8 1.0
OG1 D:THR45 4.8 63.0 1.0
O D:ALA73 4.8 83.9 1.0
HB D:THR109 4.9 77.6 1.0
O D:GLY108 4.9 69.8 1.0

Chlorine binding site 8 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 8 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl404

b:0.8
occ:1.00
OE2 D:GLU185 3.1 68.4 1.0
HB2 D:ASN263 3.3 54.9 1.0
HD22 D:ASN263 3.4 63.2 1.0
OE1 D:GLU185 3.6 57.3 1.0
CD D:GLU185 3.7 63.6 1.0
HA3 D:GLY295 4.1 47.4 1.0
ND2 D:ASN263 4.1 52.6 1.0
CB D:ASN263 4.2 45.7 1.0
O D:MET262 4.2 48.1 1.0
HG22 D:ILE293 4.2 57.8 1.0
HB3 D:LEU261 4.3 55.2 1.0
CG D:ASN263 4.6 52.6 1.0
HD21 D:ASN263 4.6 63.2 1.0
HA D:ASN263 4.8 59.7 1.0
H D:GLY295 4.8 51.4 1.0
HB3 D:ASN263 4.8 54.9 1.0
C D:MET262 4.8 45.2 1.0
HG21 D:ILE293 4.8 57.8 1.0
HG22 C:VAL297 4.9 52.1 1.0
CA D:GLY295 5.0 39.5 1.0
CA D:ASN263 5.0 49.8 1.0
CG2 D:ILE293 5.0 48.1 1.0

Chlorine binding site 9 out of 9 in 6rvm

Go back to Chlorine Binding Sites List in 6rvm
Chlorine binding site 9 out of 9 in the Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Cell Division Protein Ftsz From Staphylococcus Aureus, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl405

b:76.5
occ:1.00
H D:GLY22 2.3 68.6 1.0
O D:SER103 2.8 64.8 1.0
HB2 D:SER103 3.1 60.8 1.0
N D:GLY22 3.1 57.2 1.0
HA3 D:GLY22 3.1 73.6 1.0
O D:GLY107 3.3 67.1 1.0
MG D:MG406 3.3 72.9 1.0
HA3 D:GLY20 3.4 61.5 1.0
HA3 D:GLY110 3.5 69.4 1.0
CA D:GLY22 3.6 61.3 1.0
H D:GLY21 3.6 71.7 1.0
H D:GLY23 3.7 66.1 1.0
O D:GLY106 3.7 88.6 1.0
O D:MET105 3.7 73.5 1.0
N D:GLY21 3.8 59.7 1.0
C D:SER103 3.8 62.9 1.0
CB D:SER103 4.0 50.7 1.0
HA2 D:GLY107 4.0 97.7 1.0
C D:GLY106 4.0 87.9 1.0
O D:VAL19 4.0 49.9 1.0
C D:GLY107 4.1 75.9 1.0
C D:GLY20 4.2 58.0 1.0
C D:GLY21 4.2 62.5 1.0
H D:GLY110 4.2 75.2 1.0
CA D:GLY20 4.2 51.2 1.0
HA D:SER103 4.2 69.9 1.0
N D:GLY23 4.3 55.1 1.0
N D:GLY107 4.3 84.6 1.0
CA D:SER103 4.3 58.2 1.0
HA2 D:GLY22 4.3 73.6 1.0
CA D:GLY107 4.3 81.4 1.0
CA D:GLY110 4.4 57.8 1.0
C D:GLY22 4.4 60.6 1.0
CA D:GLY21 4.5 54.2 1.0
H D:THR111 4.5 69.1 1.0
HA3 D:GLY106 4.5 0.0 1.0
HB3 D:SER103 4.6 60.8 1.0
OG D:SER103 4.6 51.5 1.0
HA3 D:GLY21 4.6 65.0 1.0
O D:GLY104 4.6 80.8 1.0
C D:MET105 4.6 72.9 1.0
N D:GLY110 4.7 62.7 1.0
HG D:SER103 4.7 61.9 1.0
CA D:GLY106 4.8 88.3 1.0
H D:GLY107 4.8 0.6 1.0
N D:THR111 4.8 57.6 1.0
HA2 D:GLY20 4.8 61.5 1.0
C D:GLY110 4.8 60.2 1.0
C D:GLY104 4.9 78.7 1.0
O D:GLY20 4.9 53.9 1.0
C D:VAL19 5.0 52.3 1.0
N D:GLY104 5.0 64.1 1.0

Reference:

S.Huecas, A.J.Canosa-Valls, L.Araujo-Bazan, F.M.Ruiz, D.V.Laurents, C.Fernandez-Tornero, J.M.Andreu. Nucleotide-Induced Folding of Cell Division Protein Ftsz From Staphylococcus Aureus. Febs J. 2020.
ISSN: ISSN 1742-464X
PubMed: 31997533
DOI: 10.1111/FEBS.15235
Page generated: Sat Jul 12 19:31:56 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy