Atomistry » Chlorine » PDB 6s07-6sa6 » 6s9a
Atomistry »
  Chlorine »
    PDB 6s07-6sa6 »
      6s9a »

Chlorine in PDB 6s9a: Artificial Gtpase-Bse Dimer of Human DYNAMIN1

Enzymatic activity of Artificial Gtpase-Bse Dimer of Human DYNAMIN1

All present enzymatic activity of Artificial Gtpase-Bse Dimer of Human DYNAMIN1:
3.6.5.5;

Protein crystallography data

The structure of Artificial Gtpase-Bse Dimer of Human DYNAMIN1, PDB code: 6s9a was solved by O.M.Ganichkin, R.Vancraenenbroeck, G.Rosenblum, H.Hofmann, O.Daumke, J.K.Noel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.73 / 1.86
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.693, 69.546, 74.277, 90.00, 113.15, 90.00
R / Rfree (%) 21.9 / 25.5

Other elements in 6s9a:

The structure of Artificial Gtpase-Bse Dimer of Human DYNAMIN1 also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Artificial Gtpase-Bse Dimer of Human DYNAMIN1 (pdb code 6s9a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Artificial Gtpase-Bse Dimer of Human DYNAMIN1, PDB code: 6s9a:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6s9a

Go back to Chlorine Binding Sites List in 6s9a
Chlorine binding site 1 out of 2 in the Artificial Gtpase-Bse Dimer of Human DYNAMIN1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Artificial Gtpase-Bse Dimer of Human DYNAMIN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl803

b:45.5
occ:1.00
O A:HOH930 2.9 40.3 1.0
O A:HOH955 3.0 44.8 1.0
O A:HOH921 3.2 44.4 1.0
N A:ASP185 3.4 35.0 1.0
CE1 B:HIS183 3.7 46.1 1.0
CA A:SER184 3.8 36.1 1.0
OD2 A:ASP185 3.8 43.2 1.0
CD A:PRO176 3.8 42.9 1.0
O A:HIS183 4.0 42.8 1.0
C A:SER184 4.1 36.8 1.0
CA A:GLY39 4.1 40.6 1.0
N A:GLY39 4.2 37.2 1.0
CG A:ASP185 4.2 39.6 1.0
CB A:ALA42 4.2 44.3 1.0
CB A:ASP185 4.2 39.7 1.0
CG A:PRO176 4.4 46.5 1.0
CA A:ASP185 4.4 37.8 1.0
OG A:SER184 4.5 36.4 1.0
ND1 B:HIS183 4.5 42.5 1.0
O B:HOH933 4.5 62.4 1.0
CB A:SER184 4.6 36.7 1.0
NE2 B:HIS183 4.6 45.2 1.0
N A:SER184 4.6 37.0 1.0
C A:HIS183 4.7 37.6 1.0
CA A:ALA42 4.8 47.3 1.0
O B:HOH952 4.8 42.9 1.0
ZN A:ZN801 4.9 45.7 1.0
O A:HOH943 4.9 41.7 1.0
C A:GLY39 4.9 45.2 1.0
N A:ALA42 5.0 48.8 1.0

Chlorine binding site 2 out of 2 in 6s9a

Go back to Chlorine Binding Sites List in 6s9a
Chlorine binding site 2 out of 2 in the Artificial Gtpase-Bse Dimer of Human DYNAMIN1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Artificial Gtpase-Bse Dimer of Human DYNAMIN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl803

b:42.6
occ:1.00
O B:HOH924 2.9 34.5 1.0
O B:HOH1007 3.0 41.0 1.0
O B:HOH990 3.1 40.8 1.0
N B:ASP185 3.4 32.0 1.0
CE1 A:HIS183 3.7 41.1 1.0
CA B:SER184 3.8 37.7 1.0
OD2 B:ASP185 3.8 38.4 1.0
CD B:PRO176 3.9 36.9 1.0
CA B:GLY39 4.0 37.0 1.0
N B:GLY39 4.1 33.3 1.0
CB B:ALA42 4.1 37.9 1.0
O B:HIS183 4.1 37.3 1.0
C B:SER184 4.1 32.8 1.0
CG B:ASP185 4.2 34.9 1.0
CB B:ASP185 4.3 32.8 1.0
CG B:PRO176 4.4 39.6 1.0
CA B:ASP185 4.5 36.2 1.0
O A:HOH942 4.5 58.5 1.0
OG B:SER184 4.5 40.1 1.0
ND1 A:HIS183 4.5 41.0 1.0
CB B:SER184 4.6 38.8 1.0
NE2 A:HIS183 4.6 44.1 1.0
N B:SER184 4.6 38.5 1.0
CA B:ALA42 4.7 40.7 1.0
C B:HIS183 4.7 39.5 1.0
C B:GLY39 4.8 37.2 1.0
N B:ALA42 4.8 43.4 1.0
ZN B:ZN801 4.9 45.9 1.0
O A:HOH939 5.0 41.7 1.0

Reference:

O.M.Ganichkin, R.Vancraenenbroeck, G.Rosenblum, H.Hofmann, O.Daumke, J.K.Noel. Gtpase-Bse Minimal Human DYNAMIN1 Construct To Be Published.
Page generated: Sat Jul 12 19:39:56 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy