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Chlorine in PDB 6t5t: Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat

Protein crystallography data

The structure of Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat, PDB code: 6t5t was solved by S.Grazulis, M.Zaremba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.95 / 1.70
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.098, 99.551, 109.901, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 21.3

Other elements in 6t5t:

The structure of Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms
Potassium (K) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat (pdb code 6t5t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat, PDB code: 6t5t:

Chlorine binding site 1 out of 1 in 6t5t

Go back to Chlorine Binding Sites List in 6t5t
Chlorine binding site 1 out of 1 in the Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:72.6
occ:1.00
CE2 A:TRP299 3.7 34.2 1.0
CD2 A:TRP299 3.7 34.7 1.0
CZ2 A:TRP299 3.9 41.7 1.0
CE3 A:TRP299 4.0 32.6 1.0
CH2 A:TRP299 4.1 44.9 1.0
CZ3 A:TRP299 4.1 32.7 1.0
NE1 A:TRP299 4.2 35.0 1.0
CG A:TRP299 4.3 36.7 1.0
CD1 A:TRP299 4.5 39.7 1.0

Reference:

E.Golovinas, E.Manakova, G.Sasnauskas, M.Zaremba. Crystal Structure of Archaeoglobus Fulgidus Argonaute Protein with Cognate Dna Oligoduplex 5'-Pattgtggccacaat To Be Published.
Page generated: Sat Jul 12 20:02:20 2025

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