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Chlorine in PDB 6tdf: Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3

Enzymatic activity of Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3

All present enzymatic activity of Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3:
2.3.1.4;

Protein crystallography data

The structure of Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3, PDB code: 6tdf was solved by O.G.Raimi, M.Stanley, D.Lockhart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.20 / 2.01
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 70.960, 101.710, 55.910, 90.00, 90.00, 90.00
R / Rfree (%) 21.1 / 26.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3 (pdb code 6tdf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3, PDB code: 6tdf:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6tdf

Go back to Chlorine Binding Sites List in 6tdf
Chlorine binding site 1 out of 2 in the Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:49.0
occ:0.50
CL2 A:N3Q202 0.0 49.0 0.5
CAB A:N3Q202 1.7 43.3 0.5
CAA A:N3Q202 2.6 41.4 0.5
CAC A:N3Q202 2.7 43.5 0.5
CAG A:N3Q202 3.0 45.3 0.5
NAH A:N3Q202 3.2 46.7 0.5
CB A:VAL113 3.6 31.2 1.0
OE2 A:GLU129 3.7 59.9 1.0
CG2 A:VAL113 3.8 34.5 1.0
CG1 A:VAL113 3.8 33.7 1.0
CAF A:N3Q202 4.0 40.9 0.5
CAD A:N3Q202 4.0 43.6 0.5
CG A:GLU129 4.0 49.0 1.0
CB A:HIS127 4.0 33.8 1.0
CD A:GLU129 4.0 55.5 1.0
NAK A:N3Q202 4.0 46.9 0.5
NAI A:N3Q202 4.1 44.8 0.5
CAE A:N3Q202 4.4 41.5 0.5
CG A:HIS127 4.5 36.3 1.0
CAJ A:N3Q202 4.6 44.8 0.5
OE1 A:GLU129 4.8 54.9 1.0
CD2 A:HIS127 4.8 36.0 1.0
CA A:VAL113 5.0 32.0 1.0

Chlorine binding site 2 out of 2 in 6tdf

Go back to Chlorine Binding Sites List in 6tdf
Chlorine binding site 2 out of 2 in the Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Aspergillus Fumigatus Glucosamine-6-Phosphate N- Acetyltransferase 1 in Complex with Compound 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:49.5
occ:0.50
CL1 A:N3Q202 0.0 49.5 0.5
CAD A:N3Q202 1.7 43.6 0.5
CAE A:N3Q202 2.6 41.5 0.5
CAC A:N3Q202 2.7 43.5 0.5
CAG A:N3Q202 3.0 45.3 0.5
NAK A:N3Q202 3.1 46.9 0.5
CD A:GLU115 3.2 49.8 1.0
CG A:GLU115 3.4 46.2 1.0
OE2 A:GLU115 3.5 49.5 1.0
OE1 A:GLU115 3.5 46.4 1.0
NE2 A:HIS127 3.9 35.8 1.0
CAF A:N3Q202 4.0 40.9 0.5
CAB A:N3Q202 4.0 43.3 0.5
CB A:GLU115 4.0 44.1 1.0
NAH A:N3Q202 4.0 46.7 0.5
CAJ A:N3Q202 4.1 44.8 0.5
CD2 A:HIS127 4.3 36.0 1.0
CE1 A:HIS127 4.4 34.9 1.0
CAA A:N3Q202 4.4 41.4 0.5
NAI A:N3Q202 4.6 44.8 0.5
CG A:HIS127 5.0 36.3 1.0

Reference:

D.Lockhart, M.Stanley, O.G.Raimi, D.Robinson, D.Boldovjakova, D.Squair, A.T.Ferenbach, W.Fang, D.M.F.Van Aalten. Targeting A Critical Step in Fungal Hexosamine Biosynthesis J.Biol.Chem. 2020.
ISSN: ESSN 1083-351X
Page generated: Sat Jul 12 20:06:09 2025

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