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Chlorine in PDB 6vu7: Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli

Protein crystallography data

The structure of Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli, PDB code: 6vu7 was solved by P.J.Stogios, E.Evdokimova, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.93 / 2.59
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.462, 110.891, 59.924, 90.00, 116.71, 90.00
R / Rfree (%) 23.8 / 29.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli (pdb code 6vu7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli, PDB code: 6vu7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6vu7

Go back to Chlorine Binding Sites List in 6vu7
Chlorine binding site 1 out of 2 in the Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:45.2
occ:1.00
NZ A:LYS47 4.1 39.2 1.0
CG A:MET60 4.2 36.8 1.0
NZ A:LYS98 4.2 46.0 1.0
CE A:MET60 4.5 37.8 1.0
OD2 A:ASP90 4.5 43.4 1.0
SD A:MET60 4.5 36.5 1.0
CD A:LYS98 4.9 40.8 1.0

Chlorine binding site 2 out of 2 in 6vu7

Go back to Chlorine Binding Sites List in 6vu7
Chlorine binding site 2 out of 2 in the Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Ybjn, A Putative Transcription Regulator From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:47.8
occ:1.00
NZ C:LYS98 2.6 41.8 1.0
CE C:MET60 4.0 52.1 1.0
CE C:LYS98 4.0 39.7 1.0
CG C:MET60 4.7 48.6 1.0
SD C:MET60 4.7 50.0 1.0
OD2 C:ASP90 4.7 42.5 1.0
CE C:LYS47 4.7 32.2 1.0
CD C:LYS98 4.9 37.6 1.0
NZ C:LYS47 4.9 32.5 1.0

Reference:

P.J.Stogios, P.J.Stogios, E.Evdokimova, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.
Page generated: Mon Jul 29 16:30:07 2024

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