Atomistry » Chlorine » PDB 6w85-6wko » 6whp
Atomistry »
  Chlorine »
    PDB 6w85-6wko »
      6whp »

Chlorine in PDB 6whp: Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A

Protein crystallography data

The structure of Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A, PDB code: 6whp was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.98 / 2.25
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 129.500, 129.500, 160.010, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 22.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A (pdb code 6whp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A, PDB code: 6whp:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6whp

Go back to Chlorine Binding Sites List in 6whp
Chlorine binding site 1 out of 3 in the Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl604

b:46.0
occ:1.00
O A:HOH806 3.6 47.3 1.0
CB A:CYS367 4.0 37.4 1.0
NH2 A:ARG258 4.0 39.2 1.0
SG A:CYS367 4.2 48.7 1.0
CL A:CL606 4.6 56.4 1.0
NH1 A:ARG258 4.6 41.0 1.0
CG2 A:THR363 4.7 41.7 1.0
NH2 A:ARG257 4.7 45.4 1.0
CZ A:ARG258 4.8 46.4 1.0

Chlorine binding site 2 out of 3 in 6whp

Go back to Chlorine Binding Sites List in 6whp
Chlorine binding site 2 out of 3 in the Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:49.6
occ:0.50
NH1 A:ARG222 3.0 55.6 1.0
NH1 A:ARG120 3.4 44.8 1.0
O A:HOH773 3.7 46.6 1.0
O A:HOH822 3.8 40.9 1.0
NH2 A:ARG120 4.0 42.5 1.0
CZ A:ARG222 4.1 55.1 1.0
ND1 A:HIS186 4.2 42.5 1.0
CZ A:ARG120 4.2 44.1 1.0
CG A:PRO119 4.3 42.6 1.0
NH2 A:ARG222 4.4 52.2 1.0
CZ A:PHE224 4.5 42.9 1.0
CE1 A:HIS186 4.6 40.4 1.0
CE1 A:PHE224 4.8 42.2 1.0

Chlorine binding site 3 out of 3 in 6whp

Go back to Chlorine Binding Sites List in 6whp
Chlorine binding site 3 out of 3 in the Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl606

b:56.4
occ:1.00
OG1 A:THR363 3.6 46.6 1.0
CG2 A:THR363 3.8 41.7 1.0
CB A:THR363 4.0 44.5 1.0
CD A:PRO364 4.1 50.1 1.0
CA A:THR363 4.1 48.4 1.0
CL A:CL604 4.6 46.0 1.0
SG A:CYS367 4.8 48.7 1.0
NH2 A:ARG257 4.9 45.4 1.0
N A:THR363 4.9 46.9 1.0

Reference:

J.Abendroth, S.L.Delker, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Structure of Choline Kinase From Cryptococcus Neoformans Var. Grubii Serotype A To Be Published.
Page generated: Sat Jul 12 21:15:00 2025

Last articles

Mg in 7DZ4
Mg in 7DZ3
Mg in 7DZ2
Mg in 7DYK
Mg in 7DXH
Mg in 7DYJ
Mg in 7DYI
Mg in 7DY2
Mg in 7DYE
Mg in 7DY6
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy