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Chlorine in PDB 6wl5: Crystal Structure of Ecmrr C-Terminal Domain

Protein crystallography data

The structure of Crystal Structure of Ecmrr C-Terminal Domain, PDB code: 6wl5 was solved by Y.Yang, C.Liu, B.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 102.93 / 1.40
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 212.393, 42.419, 115.798, 90, 117.27, 90
R / Rfree (%) 14.2 / 17.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Ecmrr C-Terminal Domain (pdb code 6wl5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Ecmrr C-Terminal Domain, PDB code: 6wl5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6wl5

Go back to Chlorine Binding Sites List in 6wl5
Chlorine binding site 1 out of 2 in the Crystal Structure of Ecmrr C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Ecmrr C-Terminal Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl306

b:49.0
occ:1.00
HZ3 A:LYS268 2.5 35.1 1.0
NZ A:LYS268 3.3 29.3 1.0
HZ2 A:LYS268 3.5 35.1 1.0
HE2 A:LYS268 3.8 36.3 1.0
HZ1 A:LYS268 3.9 35.1 1.0
CE A:LYS268 4.0 30.2 1.0
HE3 A:LYS268 4.1 36.3 1.0

Chlorine binding site 2 out of 2 in 6wl5

Go back to Chlorine Binding Sites List in 6wl5
Chlorine binding site 2 out of 2 in the Crystal Structure of Ecmrr C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Ecmrr C-Terminal Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl307

b:26.9
occ:1.00
HG C:SER137 2.2 19.3 1.0
H C:SER137 2.4 15.8 1.0
OG C:SER137 3.0 16.1 1.0
O C:HOH647 3.1 31.1 1.0
N C:SER137 3.2 13.2 1.0
HB3 C:PHE136 3.2 15.8 1.0
HB2 C:ASP135 3.2 19.7 1.0
H C:PHE136 3.2 17.1 1.0
HB2 C:SER137 3.4 19.6 1.0
CB C:SER137 3.6 16.3 1.0
HG2 B:GLN253 3.6 16.1 1.0
N C:PHE136 3.7 14.2 1.0
O B:HOH537 3.8 22.4 1.0
O C:HOH423 3.9 18.7 1.0
CA C:SER137 4.0 14.8 1.0
CB C:PHE136 4.0 13.2 1.0
CB C:ASP135 4.0 16.4 1.0
C C:PHE136 4.1 12.6 1.0
CA C:PHE136 4.1 13.7 1.0
CG C:ASP135 4.2 19.5 1.0
OD1 C:ASP135 4.2 17.2 1.0
HG3 B:GLN253 4.2 16.1 1.0
HD2 C:PHE136 4.3 16.2 1.0
O C:HOH489 4.3 20.9 1.0
CG B:GLN253 4.4 13.4 1.0
HA C:SER137 4.4 17.8 1.0
HE21 B:GLN253 4.4 17.1 1.0
HB2 C:PHE136 4.5 15.8 1.0
HB3 C:SER137 4.5 19.6 1.0
C C:ASP135 4.6 13.6 1.0
HB3 C:ASP135 4.6 19.7 1.0
O C:HOH620 4.7 23.0 1.0
H C:SER138 4.7 17.8 1.0
OD2 C:ASP135 4.8 25.4 1.0
CA C:ASP135 4.9 13.6 1.0
CD2 C:PHE136 5.0 13.5 1.0

Reference:

Y.Yang, C.Liu, D.Matthies, Z.Yu, T.A.Steitz, Y.Hu, B.Liu. Mechanism of Transcription Regulation By Ecmrr To Be Published.
Page generated: Sat Jul 12 21:18:23 2025

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