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Chlorine in PDB 6wqy: GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis

Enzymatic activity of GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis

All present enzymatic activity of GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis:
3.2.1.4;

Protein crystallography data

The structure of GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis, PDB code: 6wqy was solved by C.A.Bingman, R.W.Smith, E.M.Glasgow, B.G.Fox, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.24 / 1.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.480, 92.310, 95.150, 90.00, 90.00, 90.00
R / Rfree (%) 13.9 / 14.5

Other elements in 6wqy:

The structure of GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis (pdb code 6wqy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis, PDB code: 6wqy:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6wqy

Go back to Chlorine Binding Sites List in 6wqy
Chlorine binding site 1 out of 2 in the GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:19.5
occ:1.00
H A:GLY282 2.3 15.1 1.0
HB2 A:ASN286 2.9 12.9 1.0
HE3 A:TRP281 2.9 15.9 1.0
HB2 A:TRP281 3.0 18.1 1.0
N A:GLY282 3.2 12.6 1.0
O A:HOH503 3.2 19.1 1.0
O A:HOH505 3.5 37.6 1.0
HA2 A:GLY282 3.5 14.7 1.0
CB A:ASN286 3.8 10.7 1.0
HA A:TRP281 3.8 16.4 1.0
O A:HOH661 3.8 18.6 1.0
CE3 A:TRP281 3.8 13.2 1.0
CB A:TRP281 3.9 15.1 1.0
CA A:GLY282 3.9 12.2 1.0
OD1 A:ASN286 4.0 11.7 1.0
H A:ASP283 4.1 13.8 1.0
CA A:TRP281 4.1 13.7 1.0
C A:TRP281 4.1 13.1 1.0
CG A:ASN286 4.2 10.2 1.0
HB3 A:ASN286 4.3 12.9 1.0
HB3 A:TRP281 4.5 18.1 1.0
HA A:ASN286 4.6 13.6 1.0
CD2 A:TRP281 4.6 12.4 1.0
O A:HOH647 4.6 28.5 1.0
HA3 A:GLY282 4.6 14.7 1.0
CG A:TRP281 4.7 14.2 1.0
OD2 A:ASP285 4.7 26.3 0.7
N A:ASP283 4.7 11.5 1.0
CA A:ASN286 4.7 11.4 1.0
H A:ASN286 4.7 13.1 1.0
HZ3 A:TRP281 4.7 16.3 1.0
C A:GLY282 4.8 10.9 1.0
CZ3 A:TRP281 4.8 13.6 1.0
N A:ASN286 4.9 10.9 1.0

Chlorine binding site 2 out of 2 in 6wqy

Go back to Chlorine Binding Sites List in 6wqy
Chlorine binding site 2 out of 2 in the GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of GH5-4 Broad Specificity Endoglucanase From Bacteroides Salanitronis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:21.1
occ:1.00
O A:HOH908 2.9 11.3 1.0
HB2 A:HIS9 3.6 17.8 1.0
HD1 A:HIS9 3.7 22.9 1.0
ND1 A:HIS9 4.2 19.1 1.0
CB A:HIS9 4.5 14.8 1.0
O A:HOH645 4.5 15.6 1.0
HB3 A:HIS7 4.6 42.3 1.0
CG A:HIS9 4.7 15.9 1.0
HB3 A:HIS9 4.8 17.8 1.0

Reference:

C.A.Bingman, R.W.Smith, C.M.Bianchetti, T.E.Takasuka, B.G.Fox. Structural Perspectives on Multifunctional GH5 Cellulases To Be Published.
Page generated: Sat Jul 12 21:22:30 2025

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