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Chlorine in PDB 6xmx: Cryo-Em Structure of BCL6 Bound to Bi-3802

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cryo-Em Structure of BCL6 Bound to Bi-3802 (pdb code 6xmx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the Cryo-Em Structure of BCL6 Bound to Bi-3802, PDB code: 6xmx:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Chlorine binding site 1 out of 8 in 6xmx

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Chlorine binding site 1 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:16.1
occ:1.00
CL1 A:U52401 0.0 16.1 1.0
C27 A:U52401 1.7 16.1 1.0
HD11 B:LEU25 2.6 15.4 1.0
C26 A:U52401 2.6 16.1 1.0
H17 A:U52401 2.7 16.1 1.0
HA A:ALA52 2.7 14.9 1.0
C22 A:U52401 2.7 16.1 1.0
HB3 A:MET51 2.7 16.3 1.0
HD21 B:LEU25 2.8 15.4 1.0
H8 A:U52401 2.8 16.1 1.0
HG B:LEU25 2.8 15.4 1.0
O A:MET51 3.0 16.3 1.0
C A:MET51 3.0 16.3 1.0
HB3 B:ASN21 3.0 15.0 1.0
N19 A:U52401 3.1 16.1 1.0
CD1 B:LEU25 3.1 15.4 1.0
N A:ALA52 3.2 14.9 1.0
HD12 B:LEU25 3.2 15.4 1.0
CG B:LEU25 3.3 15.4 1.0
HD1 A:TYR58 3.3 16.6 1.0
HB2 A:MET51 3.3 16.3 1.0
CB A:MET51 3.4 16.3 1.0
CA A:ALA52 3.4 14.9 1.0
CD2 B:LEU25 3.4 15.4 1.0
H A:ALA52 3.7 14.9 1.0
CA A:MET51 3.8 16.3 1.0
N25 A:U52401 3.9 16.1 1.0
O B:ASN21 3.9 15.0 1.0
N23 A:U52401 3.9 16.1 1.0
CB B:ASN21 4.0 15.0 1.0
CD1 A:TYR58 4.0 16.6 1.0
HD23 B:LEU25 4.0 15.4 1.0
HD13 B:LEU25 4.0 15.4 1.0
HB2 A:ALA52 4.1 14.9 1.0
HD22 B:LEU25 4.1 15.4 1.0
HE2 A:MET51 4.2 16.3 1.0
HA A:MET51 4.3 16.3 1.0
HB2 A:TYR58 4.3 16.6 1.0
CB A:ALA52 4.3 14.9 1.0
C B:ASN21 4.4 15.0 1.0
C24 A:U52401 4.4 16.1 1.0
HE1 A:TYR58 4.4 16.6 1.0
HB2 B:ASN21 4.4 15.0 1.0
C A:ALA52 4.5 14.9 1.0
C18 A:U52401 4.5 16.1 1.0
CE1 A:TYR58 4.6 16.6 1.0
CG A:MET51 4.7 16.3 1.0
CA B:ASN21 4.7 15.0 1.0
CB B:LEU25 4.7 15.4 1.0
CG B:ASN21 4.8 15.0 1.0
O A:THR48 4.8 16.2 1.0
HB1 A:ALA52 4.8 14.9 1.0
HA B:LEU22 4.8 14.9 1.0
HA B:ASN21 4.9 15.0 1.0
O A:ALA52 4.9 14.9 1.0
CG A:TYR58 4.9 16.6 1.0
H7 A:U52401 4.9 16.1 1.0
N A:MET51 5.0 16.3 1.0
HB2 B:LEU25 5.0 15.4 1.0

Chlorine binding site 2 out of 8 in 6xmx

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Chlorine binding site 2 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:19.6
occ:1.00
CL1 B:U52401 0.0 19.6 1.0
C27 B:U52401 1.7 19.6 1.0
HB3 A:ASN21 2.4 18.1 1.0
C26 B:U52401 2.6 19.6 1.0
H17 B:U52401 2.7 19.6 1.0
HA B:ALA52 2.7 16.7 1.0
C22 B:U52401 2.7 19.6 1.0
HB3 B:MET51 2.7 17.2 1.0
H8 B:U52401 2.8 19.6 1.0
HD11 A:LEU25 2.9 17.7 1.0
O B:MET51 3.0 17.2 1.0
C B:MET51 3.0 17.2 1.0
N19 B:U52401 3.1 19.6 1.0
HG A:LEU25 3.1 17.7 1.0
N B:ALA52 3.2 16.7 1.0
CB A:ASN21 3.3 18.1 1.0
HD1 B:TYR58 3.3 17.9 1.0
HB2 B:MET51 3.3 17.2 1.0
CB B:MET51 3.4 17.2 1.0
HD21 A:LEU25 3.4 17.7 1.0
CA B:ALA52 3.4 16.7 1.0
CD1 A:LEU25 3.6 17.7 1.0
O A:ASN21 3.7 18.1 1.0
CG A:LEU25 3.7 17.7 1.0
H B:ALA52 3.7 16.7 1.0
HB2 A:ASN21 3.8 18.1 1.0
CA B:MET51 3.8 17.2 1.0
HD12 A:LEU25 3.9 17.7 1.0
N25 B:U52401 3.9 19.6 1.0
C A:ASN21 3.9 18.1 1.0
N23 B:U52401 3.9 19.6 1.0
CG A:ASN21 4.0 18.1 1.0
CD1 B:TYR58 4.0 17.9 1.0
CD2 A:LEU25 4.0 17.7 1.0
HB2 B:ALA52 4.1 16.7 1.0
CA A:ASN21 4.1 18.1 1.0
HE2 B:MET51 4.2 17.2 1.0
HB2 B:TYR58 4.3 17.9 1.0
HA B:MET51 4.3 17.2 1.0
HA A:ASN21 4.3 18.1 1.0
CB B:ALA52 4.3 16.7 1.0
HE1 B:TYR58 4.4 17.9 1.0
C24 B:U52401 4.4 19.6 1.0
HD13 A:LEU25 4.4 17.7 1.0
C18 B:U52401 4.5 19.6 1.0
C B:ALA52 4.5 16.7 1.0
OD1 A:ASN21 4.5 18.1 1.0
HD23 A:LEU25 4.6 17.7 1.0
CE1 B:TYR58 4.6 17.9 1.0
CG B:MET51 4.7 17.2 1.0
ND2 A:ASN21 4.7 18.1 1.0
HD22 A:ASN21 4.7 18.1 1.0
HD22 A:LEU25 4.7 17.7 1.0
N A:LEU22 4.7 17.0 1.0
HA A:LEU22 4.7 17.0 1.0
HB1 B:ALA52 4.7 16.7 1.0
O B:THR48 4.8 16.5 1.0
O B:ALA52 4.9 16.7 1.0
CG B:TYR58 4.9 17.9 1.0
H7 B:U52401 4.9 19.6 1.0
N B:MET51 4.9 17.2 1.0
HG2 B:MET51 5.0 17.2 1.0
CB B:TYR58 5.0 17.9 1.0

Chlorine binding site 3 out of 8 in 6xmx

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Chlorine binding site 3 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl401

b:26.6
occ:1.00
CL1 C:U52401 0.0 26.6 1.0
C27 C:U52401 1.7 26.6 1.0
HD11 D:LEU25 2.5 25.9 1.0
C26 C:U52401 2.6 26.6 1.0
HD21 D:LEU25 2.7 25.9 1.0
H17 C:U52401 2.7 26.6 1.0
C22 C:U52401 2.7 26.6 1.0
HB3 C:MET51 2.7 28.3 1.0
HA C:ALA52 2.7 26.6 1.0
H8 C:U52401 2.8 26.6 1.0
HG D:LEU25 2.8 25.9 1.0
O C:MET51 3.0 28.3 1.0
C C:MET51 3.0 28.3 1.0
N19 C:U52401 3.1 26.6 1.0
CD1 D:LEU25 3.1 25.9 1.0
HB3 D:ASN21 3.2 25.7 1.0
CG D:LEU25 3.2 25.9 1.0
N C:ALA52 3.2 26.6 1.0
HD12 D:LEU25 3.3 25.9 1.0
HD1 C:TYR58 3.3 28.0 1.0
HB2 C:MET51 3.3 28.3 1.0
CD2 D:LEU25 3.3 25.9 1.0
CB C:MET51 3.3 28.3 1.0
CA C:ALA52 3.4 26.6 1.0
H C:ALA52 3.7 26.6 1.0
CA C:MET51 3.8 28.3 1.0
HD23 D:LEU25 3.8 25.9 1.0
N25 C:U52401 3.9 26.6 1.0
N23 C:U52401 3.9 26.6 1.0
O D:ASN21 4.0 25.7 1.0
HD13 D:LEU25 4.0 25.9 1.0
CD1 C:TYR58 4.0 28.0 1.0
HB2 C:ALA52 4.1 26.6 1.0
HD22 D:LEU25 4.1 25.9 1.0
CB D:ASN21 4.1 25.7 1.0
HB2 C:TYR58 4.3 28.0 1.0
HA C:MET51 4.3 28.3 1.0
HE2 C:MET51 4.3 28.3 1.0
CB C:ALA52 4.3 26.6 1.0
C24 C:U52401 4.4 26.6 1.0
HE1 C:TYR58 4.4 28.0 1.0
C D:ASN21 4.4 25.7 1.0
C C:ALA52 4.5 26.6 1.0
C18 C:U52401 4.5 26.6 1.0
HB2 D:ASN21 4.6 25.7 1.0
CE1 C:TYR58 4.6 28.0 1.0
CG C:MET51 4.7 28.3 1.0
CB D:LEU25 4.7 25.9 1.0
O C:THR48 4.8 28.9 1.0
CA D:ASN21 4.8 25.7 1.0
HB1 C:ALA52 4.8 26.6 1.0
CG D:ASN21 4.9 25.7 1.0
O C:ALA52 4.9 26.6 1.0
CG C:TYR58 4.9 28.0 1.0
HA D:LEU22 4.9 26.3 1.0
HA D:ASN21 4.9 25.7 1.0
N C:MET51 4.9 28.3 1.0
H7 C:U52401 4.9 26.6 1.0
HB2 D:LEU25 4.9 25.9 1.0
HG2 C:MET51 5.0 28.3 1.0
CB C:TYR58 5.0 28.0 1.0

Chlorine binding site 4 out of 8 in 6xmx

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Chlorine binding site 4 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl401

b:31.2
occ:1.00
CL1 D:U52401 0.0 31.2 1.0
C27 D:U52401 1.7 31.2 1.0
C26 D:U52401 2.6 31.2 1.0
HB3 C:ASN21 2.7 31.6 1.0
H17 D:U52401 2.7 31.2 1.0
C22 D:U52401 2.7 31.2 1.0
HA D:ALA52 2.7 30.3 1.0
HB3 D:MET51 2.7 30.1 1.0
H8 D:U52401 2.8 31.2 1.0
HD11 C:LEU25 3.0 30.5 1.0
O D:MET51 3.0 30.1 1.0
C D:MET51 3.0 30.1 1.0
N19 D:U52401 3.1 31.2 1.0
N D:ALA52 3.2 30.3 1.0
HD1 D:TYR58 3.3 30.4 1.0
HG C:LEU25 3.3 30.5 1.0
HB2 D:MET51 3.3 30.1 1.0
CB D:MET51 3.4 30.1 1.0
HD21 C:LEU25 3.4 30.5 1.0
CA D:ALA52 3.4 30.3 1.0
CB C:ASN21 3.6 31.6 1.0
CD1 C:LEU25 3.7 30.5 1.0
H D:ALA52 3.7 30.3 1.0
CA D:MET51 3.8 30.1 1.0
CG C:LEU25 3.8 30.5 1.0
N25 D:U52401 3.9 31.2 1.0
HD12 C:LEU25 3.9 30.5 1.0
N23 D:U52401 3.9 31.2 1.0
CD1 D:TYR58 4.0 30.4 1.0
HB2 C:ASN21 4.0 31.6 1.0
O C:ASN21 4.0 31.6 1.0
CD2 C:LEU25 4.1 30.5 1.0
HB2 D:ALA52 4.1 30.3 1.0
HE2 D:MET51 4.2 30.1 1.0
HB2 D:TYR58 4.3 30.4 1.0
CG C:ASN21 4.3 31.6 1.0
HA D:MET51 4.3 30.1 1.0
C C:ASN21 4.3 31.6 1.0
CB D:ALA52 4.3 30.3 1.0
C24 D:U52401 4.4 31.2 1.0
HE1 D:TYR58 4.4 30.4 1.0
C18 D:U52401 4.5 31.2 1.0
C D:ALA52 4.5 30.3 1.0
CA C:ASN21 4.5 31.6 1.0
HD13 C:LEU25 4.5 30.5 1.0
HD23 C:LEU25 4.6 30.5 1.0
CE1 D:TYR58 4.6 30.4 1.0
HA C:ASN21 4.7 31.6 1.0
CG D:MET51 4.7 30.1 1.0
HB1 D:ALA52 4.7 30.3 1.0
OD1 C:ASN21 4.7 31.6 1.0
HD22 C:LEU25 4.8 30.5 1.0
O D:THR48 4.8 29.4 1.0
HD22 C:ASN21 4.8 31.6 1.0
ND2 C:ASN21 4.8 31.6 1.0
O D:ALA52 4.9 30.3 1.0
CG D:TYR58 4.9 30.4 1.0
H7 D:U52401 4.9 31.2 1.0
N D:MET51 5.0 30.1 1.0
HG2 D:MET51 5.0 30.1 1.0

Chlorine binding site 5 out of 8 in 6xmx

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Chlorine binding site 5 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl401

b:17.0
occ:1.00
CL1 E:U52401 0.0 17.0 1.0
C27 E:U52401 1.7 17.0 1.0
HB3 F:ASN21 2.5 15.5 1.0
C26 E:U52401 2.6 17.0 1.0
H17 E:U52401 2.7 17.0 1.0
HB3 E:MET51 2.7 14.9 1.0
C22 E:U52401 2.7 17.0 1.0
HA E:ALA52 2.7 14.5 1.0
H8 E:U52401 2.8 17.0 1.0
O E:MET51 3.0 14.9 1.0
C E:MET51 3.0 14.9 1.0
HD11 F:LEU25 3.0 15.8 1.0
N19 E:U52401 3.1 17.0 1.0
HG F:LEU25 3.2 15.8 1.0
N E:ALA52 3.2 14.5 1.0
HD1 E:TYR58 3.3 15.3 1.0
CB E:MET51 3.4 14.9 1.0
HD21 F:LEU25 3.4 15.8 1.0
HB2 E:MET51 3.4 14.9 1.0
CA E:ALA52 3.4 14.5 1.0
CB F:ASN21 3.4 15.5 1.0
CD1 F:LEU25 3.7 15.8 1.0
H E:ALA52 3.7 14.5 1.0
CG F:LEU25 3.8 15.8 1.0
CA E:MET51 3.8 14.9 1.0
O F:ASN21 3.8 15.5 1.0
HB2 F:ASN21 3.8 15.5 1.0
N25 E:U52401 3.9 17.0 1.0
HD12 F:LEU25 3.9 15.8 1.0
N23 E:U52401 3.9 17.0 1.0
CD1 E:TYR58 4.0 15.3 1.0
CD2 F:LEU25 4.0 15.8 1.0
CG F:ASN21 4.1 15.5 1.0
HB2 E:ALA52 4.1 14.5 1.0
C F:ASN21 4.1 15.5 1.0
HE2 E:MET51 4.2 14.9 1.0
CA F:ASN21 4.2 15.5 1.0
HA E:MET51 4.3 14.9 1.0
HB2 E:TYR58 4.3 15.3 1.0
CB E:ALA52 4.3 14.5 1.0
C24 E:U52401 4.4 17.0 1.0
HE1 E:TYR58 4.4 15.3 1.0
HA F:ASN21 4.4 15.5 1.0
C18 E:U52401 4.5 17.0 1.0
C E:ALA52 4.5 14.5 1.0
OD1 F:ASN21 4.5 15.5 1.0
HD13 F:LEU25 4.5 15.8 1.0
HD23 F:LEU25 4.6 15.8 1.0
CE1 E:TYR58 4.6 15.3 1.0
CG E:MET51 4.7 14.9 1.0
ND2 F:ASN21 4.7 15.5 1.0
HD22 F:LEU25 4.7 15.8 1.0
HD22 F:ASN21 4.7 15.5 1.0
O E:THR48 4.8 14.7 1.0
HB1 E:ALA52 4.8 14.5 1.0
O E:ALA52 4.9 14.5 1.0
N F:LEU22 4.9 15.3 1.0
CG E:TYR58 4.9 15.3 1.0
HA F:LEU22 4.9 15.3 1.0
H7 E:U52401 4.9 17.0 1.0
N E:MET51 4.9 14.9 1.0
HG2 E:MET51 5.0 14.9 1.0
CB E:TYR58 5.0 15.3 1.0

Chlorine binding site 6 out of 8 in 6xmx

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Chlorine binding site 6 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl401

b:16.8
occ:1.00
CL1 F:U52401 0.0 16.8 1.0
C27 F:U52401 1.7 16.8 1.0
HD11 E:LEU25 2.6 14.5 1.0
HD21 E:LEU25 2.6 14.5 1.0
C26 F:U52401 2.6 16.8 1.0
C22 F:U52401 2.7 16.8 1.0
HA F:ALA52 2.7 14.2 1.0
H17 F:U52401 2.7 16.8 1.0
HB3 F:MET51 2.7 15.1 1.0
H8 F:U52401 2.8 16.8 1.0
HG E:LEU25 2.8 14.5 1.0
O F:MET51 3.0 15.1 1.0
C F:MET51 3.0 15.1 1.0
CD1 E:LEU25 3.1 14.5 1.0
N19 F:U52401 3.1 16.8 1.0
HD12 E:LEU25 3.1 14.5 1.0
CG E:LEU25 3.1 14.5 1.0
N F:ALA52 3.2 14.2 1.0
CD2 E:LEU25 3.2 14.5 1.0
HD1 F:TYR58 3.3 15.6 1.0
HB2 F:MET51 3.3 15.1 1.0
CB F:MET51 3.4 15.1 1.0
HB3 E:ASN21 3.4 14.0 1.0
CA F:ALA52 3.4 14.2 1.0
HD23 E:LEU25 3.6 14.5 1.0
H F:ALA52 3.7 14.2 1.0
CA F:MET51 3.8 15.1 1.0
N25 F:U52401 3.9 16.8 1.0
N23 F:U52401 3.9 16.8 1.0
HD13 E:LEU25 4.0 14.5 1.0
HD22 E:LEU25 4.0 14.5 1.0
CD1 F:TYR58 4.0 15.6 1.0
HB2 F:ALA52 4.1 14.2 1.0
O E:ASN21 4.1 14.0 1.0
HE2 F:MET51 4.2 15.1 1.0
HB2 F:TYR58 4.3 15.6 1.0
HA F:MET51 4.3 15.1 1.0
CB F:ALA52 4.3 14.2 1.0
CB E:ASN21 4.3 14.0 1.0
HE1 F:TYR58 4.4 15.6 1.0
C24 F:U52401 4.4 16.8 1.0
C18 F:U52401 4.5 16.8 1.0
C F:ALA52 4.5 14.2 1.0
CE1 F:TYR58 4.6 15.6 1.0
C E:ASN21 4.6 14.0 1.0
CB E:LEU25 4.6 14.5 1.0
CG F:MET51 4.7 15.1 1.0
O F:THR48 4.8 15.1 1.0
HB1 F:ALA52 4.8 14.2 1.0
HB2 E:ASN21 4.8 14.0 1.0
O F:ALA52 4.9 14.2 1.0
CG F:TYR58 4.9 15.6 1.0
HB2 E:LEU25 4.9 14.5 1.0
H7 F:U52401 4.9 16.8 1.0
N F:MET51 5.0 15.1 1.0
HG2 F:MET51 5.0 15.1 1.0
HA E:LEU22 5.0 13.9 1.0
CA E:ASN21 5.0 14.0 1.0

Chlorine binding site 7 out of 8 in 6xmx

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Chlorine binding site 7 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl401

b:25.9
occ:1.00
CL1 G:U52401 0.0 25.9 1.0
C27 G:U52401 1.7 25.9 1.0
C26 G:U52401 2.6 25.9 1.0
H17 G:U52401 2.7 25.9 1.0
C22 G:U52401 2.7 25.9 1.0
HB3 G:MET51 2.7 24.9 1.0
HA G:ALA52 2.7 25.1 1.0
HD11 H:LEU25 2.7 25.4 1.0
H8 G:U52401 2.8 25.9 1.0
HB3 H:ASN21 2.8 25.7 1.0
O G:MET51 3.0 24.9 1.0
C G:MET51 3.0 24.9 1.0
N19 G:U52401 3.1 25.9 1.0
N G:ALA52 3.2 25.1 1.0
HG H:LEU25 3.2 25.4 1.0
HD21 H:LEU25 3.2 25.4 1.0
HD1 G:TYR58 3.3 25.0 1.0
HB2 G:MET51 3.4 24.9 1.0
CB G:MET51 3.4 24.9 1.0
CA G:ALA52 3.4 25.1 1.0
CD1 H:LEU25 3.5 25.4 1.0
CG H:LEU25 3.7 25.4 1.0
H G:ALA52 3.7 25.1 1.0
HD12 H:LEU25 3.7 25.4 1.0
CB H:ASN21 3.8 25.7 1.0
CA G:MET51 3.8 24.9 1.0
N25 G:U52401 3.9 25.9 1.0
CD2 H:LEU25 3.9 25.4 1.0
N23 G:U52401 3.9 25.9 1.0
CD1 G:TYR58 4.0 25.0 1.0
O H:ASN21 4.0 25.7 1.0
HB2 G:ALA52 4.1 25.1 1.0
HB2 H:ASN21 4.1 25.7 1.0
HE2 G:MET51 4.2 24.9 1.0
HB2 G:TYR58 4.3 25.0 1.0
HA G:MET51 4.3 24.9 1.0
HD13 H:LEU25 4.3 25.4 1.0
CB G:ALA52 4.3 25.1 1.0
C H:ASN21 4.3 25.7 1.0
C24 G:U52401 4.4 25.9 1.0
HE1 G:TYR58 4.4 25.0 1.0
CG H:ASN21 4.4 25.7 1.0
C18 G:U52401 4.5 25.9 1.0
C G:ALA52 4.5 25.1 1.0
HD23 H:LEU25 4.5 25.4 1.0
HD22 H:LEU25 4.5 25.4 1.0
CA H:ASN21 4.6 25.7 1.0
CE1 G:TYR58 4.6 25.0 1.0
CG G:MET51 4.7 24.9 1.0
HB1 G:ALA52 4.7 25.1 1.0
O G:THR48 4.8 24.6 1.0
HA H:ASN21 4.8 25.7 1.0
O G:ALA52 4.9 25.1 1.0
CG G:TYR58 4.9 25.0 1.0
OD1 H:ASN21 4.9 25.7 1.0
HA H:LEU22 4.9 25.2 1.0
H7 G:U52401 4.9 25.9 1.0
N G:MET51 5.0 24.9 1.0
HD22 H:ASN21 5.0 25.7 1.0

Chlorine binding site 8 out of 8 in 6xmx

Go back to Chlorine Binding Sites List in 6xmx
Chlorine binding site 8 out of 8 in the Cryo-Em Structure of BCL6 Bound to Bi-3802


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Cryo-Em Structure of BCL6 Bound to Bi-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl401

b:24.5
occ:1.00
CL1 H:U52401 0.0 24.5 1.0
C27 H:U52401 1.7 24.5 1.0
HD11 G:LEU25 2.6 22.9 1.0
C26 H:U52401 2.6 24.5 1.0
H17 H:U52401 2.7 24.5 1.0
C22 H:U52401 2.7 24.5 1.0
HA H:ALA52 2.7 23.5 1.0
HB3 H:MET51 2.7 24.5 1.0
H8 H:U52401 2.8 24.5 1.0
HD21 G:LEU25 2.8 22.9 1.0
HG G:LEU25 2.8 22.9 1.0
O H:MET51 3.0 24.5 1.0
HB3 G:ASN21 3.0 23.1 1.0
C H:MET51 3.0 24.5 1.0
N19 H:U52401 3.1 24.5 1.0
CD1 G:LEU25 3.1 22.9 1.0
HD12 G:LEU25 3.1 22.9 1.0
N H:ALA52 3.2 23.5 1.0
CG G:LEU25 3.2 22.9 1.0
HB2 H:MET51 3.3 24.5 1.0
HD1 H:TYR58 3.3 25.4 1.0
CB H:MET51 3.3 24.5 1.0
CA H:ALA52 3.4 23.5 1.0
CD2 G:LEU25 3.4 22.9 1.0
H H:ALA52 3.7 23.5 1.0
CA H:MET51 3.8 24.5 1.0
O G:ASN21 3.8 23.1 1.0
N25 H:U52401 3.9 24.5 1.0
N23 H:U52401 3.9 24.5 1.0
CB G:ASN21 3.9 23.1 1.0
HD23 G:LEU25 4.0 22.9 1.0
CD1 H:TYR58 4.0 25.4 1.0
HD13 G:LEU25 4.0 22.9 1.0
HB2 H:ALA52 4.1 23.5 1.0
HD22 G:LEU25 4.1 22.9 1.0
HE2 H:MET51 4.2 24.5 1.0
HB2 H:TYR58 4.3 25.4 1.0
HA H:MET51 4.3 24.5 1.0
C G:ASN21 4.3 23.1 1.0
CB H:ALA52 4.3 23.5 1.0
HE1 H:TYR58 4.4 25.4 1.0
C24 H:U52401 4.4 24.5 1.0
HB2 G:ASN21 4.4 23.1 1.0
C H:ALA52 4.5 23.5 1.0
C18 H:U52401 4.5 24.5 1.0
CE1 H:TYR58 4.6 25.4 1.0
CA G:ASN21 4.6 23.1 1.0
CG H:MET51 4.7 24.5 1.0
CB G:LEU25 4.7 22.9 1.0
CG G:ASN21 4.7 23.1 1.0
HA G:LEU22 4.7 23.2 1.0
O H:THR48 4.8 24.2 1.0
HA G:ASN21 4.8 23.1 1.0
HB1 H:ALA52 4.8 23.5 1.0
O H:ALA52 4.9 23.5 1.0
CG H:TYR58 4.9 25.4 1.0
HB2 G:LEU25 4.9 22.9 1.0
N H:MET51 4.9 24.5 1.0
H7 H:U52401 4.9 24.5 1.0
HG2 H:MET51 5.0 24.5 1.0
CB H:TYR58 5.0 25.4 1.0

Reference:

M.Slabicki, H.Yoon, J.Koeppel, L.Nitsch, S.S.Roy Burman, C.Di Genua, K.A.Donovan, A.S.Sperling, M.Hunkeler, J.M.Tsai, R.Sharma, A.Guirguis, C.Zou, P.Chudasama, J.A.Gasser, P.G.Miller, C.Scholl, S.Frohling, R.P.Nowak, E.S.Fischer, B.L.Ebert. Small-Molecule-Induced Polymerization Triggers Degradation of BCL6. Nature 2020.
ISSN: ESSN 1476-4687
PubMed: 33208943
DOI: 10.1038/S41586-020-2925-1
Page generated: Sat Jul 12 21:43:08 2025

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