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Chlorine in PDB 6y8h: Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface.

Enzymatic activity of Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface.

All present enzymatic activity of Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface.:
2.7.11.24;

Protein crystallography data

The structure of Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface., PDB code: 6y8h was solved by G.F.De Nicola, C.E.Nichols, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.16 / 1.37
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 80.864, 102.325, 103.821, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 24

Other elements in 6y8h:

The structure of Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface. also contains other interesting chemical elements:

Fluorine (F) 1 atom
Calcium (Ca) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface. (pdb code 6y8h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface., PDB code: 6y8h:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6y8h

Go back to Chlorine Binding Sites List in 6y8h
Chlorine binding site 1 out of 2 in the Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl407

b:52.5
occ:1.00
O A:HOH507 2.8 35.9 1.0
N A:SER252 3.0 28.3 1.0
O A:HOH509 3.1 36.6 1.0
CB A:SER252 3.3 36.9 1.0
N A:SER251 3.5 28.3 1.0
CA A:SER252 3.7 28.5 1.0
CG2 A:ILE250 3.8 25.1 1.0
C A:SER251 3.9 29.6 1.0
CB A:SER251 4.0 33.7 1.0
CA A:SER251 4.0 26.5 1.0
O A:ASN196 4.0 37.7 1.0
O A:LEU195 4.3 36.9 1.0
C A:ILE250 4.3 30.9 1.0
OG A:SER252 4.5 34.3 1.0
CA A:ILE250 4.6 24.9 1.0
OG A:SER251 4.7 33.4 1.0
C A:SER252 4.8 25.7 1.0
CB A:ALA255 4.8 28.5 1.0
CB A:ILE250 4.9 25.1 1.0
O A:SER252 4.9 24.7 1.0
C A:ASN196 4.9 42.3 1.0

Chlorine binding site 2 out of 2 in 6y8h

Go back to Chlorine Binding Sites List in 6y8h
Chlorine binding site 2 out of 2 in the Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non- Canonical Ppi Surface. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl408

b:25.9
occ:1.00
OG A:SER154 2.9 20.0 1.0
N A:SER154 3.0 15.2 1.0
CB A:SER154 3.3 18.8 1.0
CD A:PRO153 3.5 16.6 1.0
CD A:LYS152 3.5 25.7 1.0
CG A:LYS152 3.6 17.2 1.0
CB A:LYS152 3.6 17.0 1.0
N A:PRO153 3.6 14.8 1.0
CA A:SER154 3.8 17.3 1.0
ND2 A:ASN114 3.8 24.0 1.0
C A:PRO153 4.0 18.1 1.0
CG2 A:THR185 4.0 23.2 1.0
CB A:PRO153 4.1 17.3 1.0
O A:HOH678 4.1 35.0 1.0
CA A:PRO153 4.1 15.2 1.0
C A:LYS152 4.1 13.6 1.0
CE1 A:TYR188 4.2 19.4 1.0
CG A:PRO153 4.2 17.5 1.0
CA A:LYS152 4.5 14.8 1.0
CD1 A:TYR188 4.6 19.0 1.0
CG A:ASN114 4.8 26.0 1.0
O A:LYS152 4.8 15.3 1.0
OD1 A:ASN114 4.9 27.8 1.0
CZ A:TYR188 4.9 19.2 1.0
C A:SER154 4.9 16.8 1.0
CE A:LYS152 5.0 27.4 1.0

Reference:

G.F.De Nicola, C.E.Nichols. Novel P38-Alpha Crystal Lattice with Highly Exposed P38/TAB1 Non-Canonical Ppi Surface. To Be Published.
Page generated: Sat Jul 12 21:58:24 2025

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