Atomistry » Chlorine » PDB 6ygb-6ynp » 6yib
Atomistry »
  Chlorine »
    PDB 6ygb-6ynp »
      6yib »

Chlorine in PDB 6yib: 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide

Protein crystallography data

The structure of 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide, PDB code: 6yib was solved by S.Kiehstaller, S.Graf, S.Hennig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.74 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 81.78, 111.69, 62.05, 90, 90, 90
R / Rfree (%) 16.7 / 20.3

Other elements in 6yib:

The structure of 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide also contains other interesting chemical elements:

Calcium (Ca) 1 atom
Magnesium (Mg) 3 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide (pdb code 6yib). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide, PDB code: 6yib:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6yib

Go back to Chlorine Binding Sites List in 6yib
Chlorine binding site 1 out of 3 in the 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:27.4
occ:1.00
NZ A:LYS9 3.1 24.2 1.0
CD A:LYS9 3.7 19.2 1.0
CE A:LYS9 3.8 23.1 1.0
CZ A:PHE25 4.2 25.9 1.0
CE1 A:PHE25 4.5 24.7 1.0
CE A:MET1 4.5 25.6 1.0
CG A:LYS9 4.9 19.6 1.0

Chlorine binding site 2 out of 3 in 6yib

Go back to Chlorine Binding Sites List in 6yib
Chlorine binding site 2 out of 3 in the 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:84.1
occ:1.00
O A:HOH676 2.8 57.6 1.0
OD1 A:ASP97 3.4 35.4 1.0
O A:HOH638 4.2 54.3 1.0
CG A:ASP97 4.2 37.4 1.0
OH A:TYR128 4.2 27.6 1.0
CD1 A:LEU100 4.3 19.4 1.0
CB A:LEU100 4.8 16.6 1.0
CE1 A:TYR128 4.8 20.8 1.0
CZ A:TYR128 4.8 22.4 1.0
CB A:ASP97 4.8 20.1 1.0
CA A:ASP97 4.8 21.3 1.0
OD2 A:ASP97 4.9 38.4 1.0
O A:HOH667 4.9 53.6 0.7
CD1 A:LEU131 5.0 19.4 1.0

Chlorine binding site 3 out of 3 in 6yib

Go back to Chlorine Binding Sites List in 6yib
Chlorine binding site 3 out of 3 in the 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of 14-3-3 Sigma in Complex with SMAD3 PS423 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl306

b:91.1
occ:1.00
O A:HOH681 3.4 59.4 1.0
O A:HOH675 3.4 50.6 1.0
O A:HOH624 4.1 43.5 1.0
O A:HOH661 4.3 36.8 1.0
O A:HOH500 4.9 34.1 1.0

Reference:

S.Graf, S.Kiehstaller, C.Ottmann, S.Hennig. Identification and Characterization of 14-3-3/Smad Protein-Protein-Interactions To Be Published.
Page generated: Sat Jul 12 22:06:35 2025

Last articles

Mg in 5SGH
Mg in 5SGG
Mg in 5SGF
Mg in 5SGE
Mg in 5SGC
Mg in 5SGD
Mg in 5SGB
Mg in 5SG9
Mg in 5SG8
Mg in 5SG7
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy