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Chlorine in PDB 6yji: Structure of FGCELDH7C

Protein crystallography data

The structure of Structure of FGCELDH7C, PDB code: 6yji was solved by M.H.Momeni, F.Fredslund, J.G.Berrin, M.A.Hachem, D.H.Welner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.18 / 1.64
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 96.536, 187.821, 55.447, 90, 90, 90
R / Rfree (%) 16.4 / 20.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of FGCELDH7C (pdb code 6yji). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of FGCELDH7C, PDB code: 6yji:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6yji

Go back to Chlorine Binding Sites List in 6yji
Chlorine binding site 1 out of 2 in the Structure of FGCELDH7C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of FGCELDH7C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl612

b:38.9
occ:1.00
OD1 A:ASP233 2.5 32.3 0.4
HG2 A:PRO291 3.0 32.7 1.0
HB2 A:LYS234 3.0 34.0 1.0
H A:LYS234 3.0 29.0 0.6
HB3 A:PHE232 3.0 26.2 1.0
H A:LYS234 3.1 29.0 0.4
HD2 A:PRO291 3.3 32.2 1.0
H A:ASP233 3.5 31.5 0.4
H A:ASP233 3.5 29.9 0.6
HD2 A:LYS234 3.5 53.2 1.0
O A:HOH988 3.5 23.3 1.0
HB2 A:ASP233 3.6 28.2 0.6
HD2 A:PHE232 3.7 25.3 1.0
N A:LYS234 3.7 24.2 1.0
CG A:ASP233 3.7 27.9 0.4
CG A:PRO291 3.7 27.2 1.0
CB A:LYS234 3.8 28.3 1.0
HG3 A:LYS234 3.8 35.9 1.0
CD A:PRO291 3.8 26.9 1.0
N A:ASP233 4.0 24.9 0.6
N A:ASP233 4.0 26.3 0.4
HD3 A:PRO291 4.0 32.2 1.0
CB A:PHE232 4.0 21.8 1.0
CG A:LYS234 4.1 29.9 1.0
CD A:LYS234 4.2 44.4 1.0
CA A:LYS234 4.3 24.4 1.0
HG3 A:PRO291 4.3 32.7 1.0
O A:LYS234 4.4 25.8 1.0
OD2 A:ASP233 4.4 37.9 0.4
CD2 A:PHE232 4.4 21.1 1.0
CB A:ASP233 4.4 23.5 0.6
HB2 A:PHE232 4.4 26.2 1.0
C A:ASP233 4.5 23.3 0.4
CA A:ASP233 4.5 24.8 0.6
HB3 A:LYS234 4.5 34.0 1.0
C A:ASP233 4.6 22.2 0.6
HB2 A:PRO291 4.6 31.6 1.0
HA A:PHE232 4.6 34.8 1.0
CA A:ASP233 4.6 25.4 0.4
C A:PHE232 4.7 25.8 1.0
CG A:PHE232 4.7 21.5 1.0
C A:LYS234 4.7 24.6 1.0
CA A:PHE232 4.7 29.0 1.0
CB A:ASP233 4.8 26.4 0.4
CB A:PRO291 4.8 26.3 1.0
HE3 A:LYS234 4.8 71.0 1.0
HZ2 A:LYS234 4.8 80.6 1.0
HB3 A:ASP233 4.9 28.2 0.6
HD3 A:LYS234 4.9 53.2 1.0

Chlorine binding site 2 out of 2 in 6yji

Go back to Chlorine Binding Sites List in 6yji
Chlorine binding site 2 out of 2 in the Structure of FGCELDH7C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of FGCELDH7C within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl611

b:40.1
occ:1.00
H B:LYS234 3.0 35.4 1.0
HB3 B:PHE232 3.2 37.8 1.0
HB2 B:LYS234 3.3 34.9 1.0
HB2 B:ASP233 3.3 45.2 1.0
H B:ASP233 3.4 35.1 1.0
HG2 B:PRO291 3.5 40.2 1.0
HG3 B:LYS234 3.5 34.9 1.0
HD2 B:PRO291 3.6 40.7 1.0
N B:LYS234 3.7 29.5 1.0
N B:ASP233 3.9 29.3 1.0
CB B:LYS234 4.0 29.1 1.0
HD1 B:PHE232 4.0 40.9 1.0
CG B:LYS234 4.1 29.1 1.0
HD2 B:LYS234 4.1 57.8 1.0
CB B:PHE232 4.1 31.5 1.0
CB B:ASP233 4.1 37.7 1.0
CD B:PRO291 4.2 33.9 1.0
CG B:PRO291 4.3 33.5 1.0
HD3 B:PRO291 4.3 40.7 1.0
CA B:LYS234 4.4 26.1 1.0
CA B:ASP233 4.4 29.1 1.0
O B:HOH703 4.4 44.7 1.0
C B:ASP233 4.5 28.9 1.0
O B:LYS234 4.5 26.7 1.0
HA B:PHE232 4.6 47.3 1.0
HB3 B:ASP233 4.6 45.2 1.0
HB2 B:PHE232 4.6 37.8 1.0
C B:PHE232 4.6 32.0 1.0
CD B:LYS234 4.7 48.2 1.0
CD1 B:PHE232 4.7 34.1 1.0
CA B:PHE232 4.7 39.4 1.0
HG3 B:PRO291 4.7 40.2 1.0
HB3 B:LYS234 4.8 34.9 1.0
CG B:PHE232 4.9 28.6 1.0
C B:LYS234 4.9 28.9 1.0
HG2 B:LYS234 5.0 34.9 1.0
HE3 B:LYS234 5.0 84.9 1.0

Reference:

F.Fredslund, M.Haddad Momeni. Structures of AA7 Enzymes To Be Published.
Page generated: Sat Jul 12 22:07:06 2025

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