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Chlorine in PDB 6zo6: Minocycline Binding to the Deep Binding Pocket of Acrb-G619P

Protein crystallography data

The structure of Minocycline Binding to the Deep Binding Pocket of Acrb-G619P, PDB code: 6zo6 was solved by H.K.Tam, W.E.Foong, K.M.Pos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.36 / 2.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 146.281, 161.008, 245.457, 90, 90, 90
R / Rfree (%) 23.1 / 25.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Minocycline Binding to the Deep Binding Pocket of Acrb-G619P (pdb code 6zo6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Minocycline Binding to the Deep Binding Pocket of Acrb-G619P, PDB code: 6zo6:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6zo6

Go back to Chlorine Binding Sites List in 6zo6
Chlorine binding site 1 out of 3 in the Minocycline Binding to the Deep Binding Pocket of Acrb-G619P


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Minocycline Binding to the Deep Binding Pocket of Acrb-G619P within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1114

b:55.6
occ:1.00
O B:HOH1290 3.0 40.8 1.0
O B:HOH1507 3.4 45.8 1.0
O B:HOH1530 3.5 50.9 1.0
N B:HIS692 3.6 40.0 1.0
O B:HOH1540 3.7 28.5 1.0
CA B:GLY691 3.8 39.6 1.0
O B:HOH1489 4.1 50.2 1.0
O B:HOH1541 4.1 46.0 1.0
C B:GLY691 4.2 39.7 1.0
CB B:HIS692 4.3 40.0 1.0
NZ B:LYS55 4.3 35.1 1.0
CA B:HIS692 4.6 40.2 1.0
O B:HOH1509 4.6 44.3 1.0
O B:HOH1533 4.7 37.7 1.0

Chlorine binding site 2 out of 3 in 6zo6

Go back to Chlorine Binding Sites List in 6zo6
Chlorine binding site 2 out of 3 in the Minocycline Binding to the Deep Binding Pocket of Acrb-G619P


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Minocycline Binding to the Deep Binding Pocket of Acrb-G619P within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1113

b:57.6
occ:1.00
NH2 C:ARG1030 3.6 57.4 1.0
NZ C:LYS950 3.6 52.5 1.0
C3 C:PTY1103 4.0 73.9 1.0
NH1 C:ARG1030 4.0 57.5 1.0
N1 C:PTY1103 4.2 73.9 1.0
CZ C:ARG1030 4.3 57.2 1.0
CE C:LYS950 4.3 52.5 1.0
C2 C:PTY1103 4.6 73.8 1.0
O13 C:PTY1103 4.8 73.9 1.0

Chlorine binding site 3 out of 3 in 6zo6

Go back to Chlorine Binding Sites List in 6zo6
Chlorine binding site 3 out of 3 in the Minocycline Binding to the Deep Binding Pocket of Acrb-G619P


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Minocycline Binding to the Deep Binding Pocket of Acrb-G619P within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1114

b:65.9
occ:1.00
O C:HOH1522 3.3 50.1 1.0
CB C:SER537 3.7 53.4 1.0
N C:GLY539 3.8 52.7 1.0
CA C:SER537 3.9 53.1 1.0
N C:ARG540 3.9 52.7 1.0
C C:SER537 3.9 52.9 1.0
CA C:GLY539 4.0 52.8 1.0
NE C:ARG540 4.0 54.7 1.0
O C:SER537 4.1 52.9 1.0
NH2 C:ARG540 4.1 55.0 1.0
C C:GLY539 4.4 52.8 1.0
N C:THR538 4.5 52.7 1.0
CZ C:ARG540 4.6 55.0 1.0
CB C:ARG540 4.6 53.2 1.0
C C:THR538 4.8 52.7 1.0
OG C:SER537 4.9 53.4 1.0
CG C:ARG540 4.9 53.8 1.0
CA C:ARG540 4.9 52.7 1.0

Reference:

H.K.Tam, W.E.Foong, K.M.Pos. Minocycline Binding to the Deep Binding Pocket of Acrb-G619P To Be Published.
Page generated: Mon Jul 29 18:07:33 2024

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