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Chlorine in PDB 6zrp: Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem

Enzymatic activity of Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem

All present enzymatic activity of Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem:
3.5.2.6;

Protein crystallography data

The structure of Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem, PDB code: 6zrp was solved by G.Tassone, F.De Luca, C.Pozzi, F.Di Pisa, M.Benvenuti, S.Mangani, J.D.Doquier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.92 / 1.74
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 46.994, 125.286, 105.199, 90, 77.7, 90
R / Rfree (%) 15.7 / 18.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem (pdb code 6zrp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem, PDB code: 6zrp:

Chlorine binding site 1 out of 1 in 6zrp

Go back to Chlorine Binding Sites List in 6zrp
Chlorine binding site 1 out of 1 in the Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Class D Beta-Lactamase Oxa-48 in Complex with Meropenem within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:20.5
occ:0.70
O A:HOH592 2.3 37.4 1.0
NH1 A:ARG206 3.1 14.0 1.0
NH2 A:ARG206 3.1 15.0 1.0
CZ A:ARG206 3.5 15.6 1.0
CA A:GLN193 4.2 17.0 1.0
CG A:GLN193 4.4 17.5 1.0
CB A:GLN193 4.5 16.4 1.0
CD2 A:LEU196 4.5 17.0 1.0
O A:HOH469 4.9 33.4 1.0
NE A:ARG206 4.9 13.9 1.0
CB A:LEU196 5.0 17.1 1.0
O A:GLN193 5.0 16.8 1.0

Reference:

G.Tassone, F.De Luca, C.Pozzi, F.Di Pisa, M.Benvenuti, S.Mangani, J.D.Doquier. Mechanistic Insights Into Carbapenem Hydrolysis By Oxa-48 and the OXA10-Derived Hybrids Oxa-10 LOOP24 and LOOP48 To Be Published.
Page generated: Mon Jul 29 18:10:39 2024

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